Protein–RNA interactions for Protein: P58321

Uchl4, Ubiquitin carboxyl-terminal hydrolase isozyme L4, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl4P58321 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Uchl4P58321 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uchl4P58321 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.27■■□□□ 1
Uchl4P58321 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uchl4P58321 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Uchl4P58321 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.27■■□□□ 1
Uchl4P58321 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.27■■□□□ 1
Uchl4P58321 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Uchl4P58321 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uchl4P58321 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Uchl4P58321 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Uchl4P58321 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Uchl4P58321 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uchl4P58321 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Uchl4P58321 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Uchl4P58321 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uchl4P58321 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Uchl4P58321 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uchl4P58321 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
Uchl4P58321 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uchl4P58321 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uchl4P58321 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uchl4P58321 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Uchl4P58321 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.25■□□□□ 0.99
Uchl4P58321 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uchl4P58321 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uchl4P58321 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uchl4P58321 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uchl4P58321 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Uchl4P58321 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.25■□□□□ 0.99
Uchl4P58321 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Uchl4P58321 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Uchl4P58321 Mir7075-201ENSMUST00000184187 82 ntBASIC21.24■□□□□ 0.99
Uchl4P58321 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uchl4P58321 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Uchl4P58321 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Uchl4P58321 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uchl4P58321 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uchl4P58321 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uchl4P58321 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.23■□□□□ 0.99
Uchl4P58321 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.23■□□□□ 0.99
Uchl4P58321 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.23■□□□□ 0.99
Uchl4P58321 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uchl4P58321 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uchl4P58321 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uchl4P58321 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uchl4P58321 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uchl4P58321 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.23■□□□□ 0.99
Uchl4P58321 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uchl4P58321 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uchl4P58321 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uchl4P58321 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Uchl4P58321 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl4P58321 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.22■□□□□ 0.99
Uchl4P58321 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl4P58321 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl4P58321 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl4P58321 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl4P58321 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl4P58321 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl4P58321 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl4P58321 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uchl4P58321 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Uchl4P58321 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Uchl4P58321 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Uchl4P58321 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Uchl4P58321 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Uchl4P58321 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Uchl4P58321 Notumos-201ENSMUST00000151998 2659 ntBASIC21.2■□□□□ 0.98
Uchl4P58321 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Uchl4P58321 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Uchl4P58321 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Uchl4P58321 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Uchl4P58321 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Uchl4P58321 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Uchl4P58321 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Uchl4P58321 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Uchl4P58321 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Uchl4P58321 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Uchl4P58321 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.19■□□□□ 0.98
Uchl4P58321 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Uchl4P58321 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.19■□□□□ 0.98
Uchl4P58321 Gm6139-201ENSMUST00000079261 882 ntBASIC21.19■□□□□ 0.98
Uchl4P58321 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Uchl4P58321 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Uchl4P58321 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Uchl4P58321 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Uchl4P58321 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Uchl4P58321 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Uchl4P58321 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Uchl4P58321 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Uchl4P58321 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Uchl4P58321 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Uchl4P58321 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Uchl4P58321 Gm12251-201ENSMUST00000117893 792 ntBASIC21.18■□□□□ 0.98
Uchl4P58321 Serp2-204ENSMUST00000228055 705 ntBASIC21.18■□□□□ 0.98
Uchl4P58321 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Uchl4P58321 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Uchl4P58321 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Uchl4P58321 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms