Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Xcl1P47993 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Xcl1P47993 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Xcl1P47993 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Xcl1P47993 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Xcl1P47993 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Xcl1P47993 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Xcl1P47993 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Xcl1P47993 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Xcl1P47993 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Xcl1P47993 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.12□□□□□ -0.31
Xcl1P47993 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Xcl1P47993 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Xcl1P47993 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Xcl1P47993 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Xcl1P47993 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC13.11□□□□□ -0.31
Xcl1P47993 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC13.11□□□□□ -0.31
Xcl1P47993 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Xcl1P47993 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 AC164883.3-201ENSMUST00000227396 1774 ntBASIC13.1□□□□□ -0.31
Xcl1P47993 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.1□□□□□ -0.31
Xcl1P47993 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Xcl1P47993 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Xcl1P47993 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Xcl1P47993 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Xcl1P47993 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Xcl1P47993 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Xcl1P47993 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Xcl1P47993 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Xcl1P47993 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Xcl1P47993 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Xcl1P47993 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Xcl1P47993 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Xcl1P47993 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Xcl1P47993 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Xcl1P47993 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Xcl1P47993 Gm5913-201ENSMUST00000119397 1399 ntBASIC13.08□□□□□ -0.31
Xcl1P47993 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Xcl1P47993 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Xcl1P47993 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Xcl1P47993 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Xcl1P47993 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Xcl1P47993 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Xcl1P47993 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Xcl1P47993 Gm5987-201ENSMUST00000196433 1151 ntBASIC13.08□□□□□ -0.32
Xcl1P47993 AC157572.2-201ENSMUST00000226970 908 ntBASIC13.08□□□□□ -0.32
Xcl1P47993 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC13.08□□□□□ -0.32
Xcl1P47993 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Xcl1P47993 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Xcl1P47993 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Xcl1P47993 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Xcl1P47993 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Xcl1P47993 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Xcl1P47993 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Xcl1P47993 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Xcl1P47993 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Xcl1P47993 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms