Protein–RNA interactions for Protein: P47741

Tnfrsf4, Tumor necrosis factor receptor superfamily member 4, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf4P47741 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf4P47741 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.31■□□□□ 0.84
Tnfrsf4P47741 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf4P47741 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf4P47741 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.31■□□□□ 0.84
Tnfrsf4P47741 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.3■□□□□ 0.84
Tnfrsf4P47741 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf4P47741 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.3■□□□□ 0.84
Tnfrsf4P47741 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.3■□□□□ 0.84
Tnfrsf4P47741 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf4P47741 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.3■□□□□ 0.84
Tnfrsf4P47741 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf4P47741 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf4P47741 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf4P47741 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf4P47741 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.29■□□□□ 0.84
Tnfrsf4P47741 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf4P47741 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf4P47741 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf4P47741 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf4P47741 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf4P47741 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf4P47741 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf4P47741 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf4P47741 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf4P47741 Reep4-203ENSMUST00000226563 1444 ntBASIC20.28■□□□□ 0.84
Tnfrsf4P47741 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf4P47741 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tnfrsf4P47741 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.28■□□□□ 0.84
Tnfrsf4P47741 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Tnfrsf4P47741 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf4P47741 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Tnfrsf4P47741 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf4P47741 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf4P47741 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Tnfrsf4P47741 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tnfrsf4P47741 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf4P47741 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tnfrsf4P47741 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tnfrsf4P47741 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf4P47741 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf4P47741 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf4P47741 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.25■□□□□ 0.83
Tnfrsf4P47741 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf4P47741 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.25■□□□□ 0.83
Tnfrsf4P47741 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf4P47741 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Tnfrsf4P47741 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf4P47741 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf4P47741 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf4P47741 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf4P47741 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Tnfrsf4P47741 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf4P47741 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf4P47741 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf4P47741 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf4P47741 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf4P47741 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tnfrsf4P47741 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.22■□□□□ 0.83
Tnfrsf4P47741 Gm7514-201ENSMUST00000209475 934 ntBASIC20.22■□□□□ 0.83
Tnfrsf4P47741 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf4P47741 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf4P47741 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf4P47741 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tnfrsf4P47741 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf4P47741 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf4P47741 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf4P47741 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf4P47741 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf4P47741 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf4P47741 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Tnfrsf4P47741 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf4P47741 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf4P47741 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf4P47741 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf4P47741 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf4P47741 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tnfrsf4P47741 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.19■□□□□ 0.82
Tnfrsf4P47741 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tnfrsf4P47741 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf4P47741 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf4P47741 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf4P47741 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf4P47741 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf4P47741 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf4P47741 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf4P47741 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf4P47741 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms