Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Rfc1P35601 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc1P35601 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.98■□□□□ 0.95
Rfc1P35601 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.98■□□□□ 0.95
Rfc1P35601 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc1P35601 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.98■□□□□ 0.95
Rfc1P35601 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.98■□□□□ 0.95
Rfc1P35601 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.98■□□□□ 0.95
Rfc1P35601 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc1P35601 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc1P35601 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc1P35601 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
Rfc1P35601 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc1P35601 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc1P35601 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rfc1P35601 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.97■□□□□ 0.95
Rfc1P35601 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc1P35601 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc1P35601 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc1P35601 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc1P35601 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc1P35601 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc1P35601 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc1P35601 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc1P35601 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc1P35601 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.96■□□□□ 0.95
Rfc1P35601 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.96■□□□□ 0.95
Rfc1P35601 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc1P35601 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc1P35601 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc1P35601 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc1P35601 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc1P35601 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc1P35601 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc1P35601 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc1P35601 Gm10420-201ENSMUST00000121713 882 ntBASIC20.95■□□□□ 0.94
Rfc1P35601 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rfc1P35601 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc1P35601 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc1P35601 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc1P35601 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Rfc1P35601 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc1P35601 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Rfc1P35601 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc1P35601 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.94■□□□□ 0.94
Rfc1P35601 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.94■□□□□ 0.94
Rfc1P35601 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc1P35601 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc1P35601 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc1P35601 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.94■□□□□ 0.94
Rfc1P35601 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc1P35601 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc1P35601 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc1P35601 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rfc1P35601 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc1P35601 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc1P35601 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc1P35601 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc1P35601 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc1P35601 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc1P35601 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc1P35601 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Rfc1P35601 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc1P35601 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc1P35601 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc1P35601 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc1P35601 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.92■□□□□ 0.94
Rfc1P35601 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc1P35601 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc1P35601 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Rfc1P35601 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.92■□□□□ 0.94
Rfc1P35601 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc1P35601 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc1P35601 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc1P35601 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rfc1P35601 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfc1P35601 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfc1P35601 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Rfc1P35601 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfc1P35601 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rfc1P35601 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfc1P35601 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.91■□□□□ 0.94
Rfc1P35601 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rfc1P35601 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfc1P35601 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfc1P35601 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfc1P35601 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfc1P35601 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfc1P35601 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.91■□□□□ 0.94
Rfc1P35601 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfc1P35601 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfc1P35601 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rfc1P35601 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
Rfc1P35601 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfc1P35601 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfc1P35601 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfc1P35601 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfc1P35601 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.9■□□□□ 0.94
Rfc1P35601 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Rfc1P35601 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms