Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cd40P27512 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd40P27512 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd40P27512 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cd40P27512 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cd40P27512 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd40P27512 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd40P27512 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd40P27512 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cd40P27512 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd40P27512 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.14■□□□□ 0.49
Cd40P27512 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.14■□□□□ 0.49
Cd40P27512 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd40P27512 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd40P27512 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd40P27512 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.14■□□□□ 0.49
Cd40P27512 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cd40P27512 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd40P27512 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.14■□□□□ 0.49
Cd40P27512 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd40P27512 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Cd40P27512 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd40P27512 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd40P27512 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.14■□□□□ 0.49
Cd40P27512 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.14■□□□□ 0.49
Cd40P27512 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd40P27512 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd40P27512 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd40P27512 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd40P27512 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd40P27512 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd40P27512 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd40P27512 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd40P27512 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd40P27512 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd40P27512 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd40P27512 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cd40P27512 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.12■□□□□ 0.49
Cd40P27512 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.12■□□□□ 0.49
Cd40P27512 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cd40P27512 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cd40P27512 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd40P27512 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd40P27512 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd40P27512 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd40P27512 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.11■□□□□ 0.49
Cd40P27512 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.11■□□□□ 0.49
Cd40P27512 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
Cd40P27512 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd40P27512 Gm21956-201ENSMUST00000179946 522 ntBASIC18.11■□□□□ 0.49
Cd40P27512 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
Cd40P27512 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cd40P27512 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd40P27512 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd40P27512 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd40P27512 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cd40P27512 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd40P27512 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.11■□□□□ 0.49
Cd40P27512 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Cd40P27512 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cd40P27512 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd40P27512 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd40P27512 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.1■□□□□ 0.49
Cd40P27512 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd40P27512 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.1■□□□□ 0.49
Cd40P27512 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd40P27512 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.1■□□□□ 0.49
Cd40P27512 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd40P27512 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd40P27512 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd40P27512 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cd40P27512 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd40P27512 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd40P27512 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.09■□□□□ 0.49
Cd40P27512 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Cd40P27512 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.09■□□□□ 0.49
Cd40P27512 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd40P27512 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd40P27512 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd40P27512 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cd40P27512 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd40P27512 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd40P27512 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd40P27512 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd40P27512 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd40P27512 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Cd40P27512 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd40P27512 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cd40P27512 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Cd40P27512 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cd40P27512 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cd40P27512 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd40P27512 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd40P27512 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.07■□□□□ 0.48
Cd40P27512 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd40P27512 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd40P27512 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd40P27512 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cd40P27512 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.07■□□□□ 0.48
Cd40P27512 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms