Protein–RNA interactions for Protein: P25785

Timp2, Metalloproteinase inhibitor 2, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp2P25785 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Timp2P25785 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Timp2P25785 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.73■□□□□ 0.75
Timp2P25785 Smad6-203ENSMUST00000179458 273 ntBASIC19.73■□□□□ 0.75
Timp2P25785 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.73■□□□□ 0.75
Timp2P25785 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.73■□□□□ 0.75
Timp2P25785 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Timp2P25785 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Timp2P25785 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Timp2P25785 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Timp2P25785 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Timp2P25785 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Timp2P25785 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Timp2P25785 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Timp2P25785 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.72■□□□□ 0.75
Timp2P25785 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Timp2P25785 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.72■□□□□ 0.75
Timp2P25785 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Timp2P25785 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Timp2P25785 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Timp2P25785 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Timp2P25785 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Timp2P25785 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Timp2P25785 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.71■□□□□ 0.75
Timp2P25785 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Timp2P25785 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Timp2P25785 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.71■□□□□ 0.75
Timp2P25785 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Timp2P25785 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.71■□□□□ 0.75
Timp2P25785 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Timp2P25785 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Timp2P25785 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Timp2P25785 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp2P25785 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Timp2P25785 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp2P25785 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp2P25785 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Timp2P25785 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp2P25785 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Timp2P25785 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp2P25785 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Timp2P25785 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp2P25785 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp2P25785 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.7■□□□□ 0.74
Timp2P25785 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp2P25785 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Timp2P25785 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Timp2P25785 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Timp2P25785 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Timp2P25785 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Timp2P25785 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Timp2P25785 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Timp2P25785 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.69■□□□□ 0.74
Timp2P25785 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Timp2P25785 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Timp2P25785 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Timp2P25785 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Timp2P25785 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Timp2P25785 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Timp2P25785 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Timp2P25785 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Timp2P25785 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Timp2P25785 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.68■□□□□ 0.74
Timp2P25785 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Timp2P25785 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Timp2P25785 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Timp2P25785 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Timp2P25785 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Timp2P25785 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Timp2P25785 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Timp2P25785 Gm18284-201ENSMUST00000172604 624 ntBASIC19.67■□□□□ 0.74
Timp2P25785 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.67■□□□□ 0.74
Timp2P25785 Gm40848-201ENSMUST00000221998 324 ntBASIC19.67■□□□□ 0.74
Timp2P25785 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Timp2P25785 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Timp2P25785 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Timp2P25785 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Timp2P25785 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Timp2P25785 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Timp2P25785 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Timp2P25785 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Timp2P25785 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.66■□□□□ 0.74
Timp2P25785 Gm43060-201ENSMUST00000200621 289 ntBASIC19.66■□□□□ 0.74
Timp2P25785 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Timp2P25785 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Timp2P25785 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Timp2P25785 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Timp2P25785 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Timp2P25785 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Timp2P25785 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Timp2P25785 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Timp2P25785 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Timp2P25785 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Timp2P25785 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Timp2P25785 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Timp2P25785 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Timp2P25785 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.64■□□□□ 0.73
Timp2P25785 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Timp2P25785 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Timp2P25785 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms