Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nid1P10493 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nid1P10493 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nid1P10493 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nid1P10493 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nid1P10493 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.84■□□□□ 0.61
Nid1P10493 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nid1P10493 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.84■□□□□ 0.61
Nid1P10493 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nid1P10493 Gm43530-201ENSMUST00000195920 274 ntBASIC18.84■□□□□ 0.61
Nid1P10493 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nid1P10493 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nid1P10493 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nid1P10493 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nid1P10493 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nid1P10493 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nid1P10493 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nid1P10493 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nid1P10493 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
Nid1P10493 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.83■□□□□ 0.6
Nid1P10493 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nid1P10493 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nid1P10493 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nid1P10493 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nid1P10493 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.82■□□□□ 0.6
Nid1P10493 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Nid1P10493 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nid1P10493 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nid1P10493 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nid1P10493 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nid1P10493 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nid1P10493 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nid1P10493 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.81■□□□□ 0.6
Nid1P10493 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nid1P10493 Mir6236-201ENSMUST00000184437 123 ntBASIC18.81■□□□□ 0.6
Nid1P10493 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nid1P10493 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nid1P10493 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Nid1P10493 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nid1P10493 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nid1P10493 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nid1P10493 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nid1P10493 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nid1P10493 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.8■□□□□ 0.6
Nid1P10493 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nid1P10493 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nid1P10493 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Nid1P10493 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nid1P10493 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nid1P10493 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nid1P10493 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nid1P10493 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nid1P10493 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nid1P10493 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nid1P10493 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
Nid1P10493 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.79■□□□□ 0.6
Nid1P10493 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.79■□□□□ 0.6
Nid1P10493 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nid1P10493 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nid1P10493 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid1P10493 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nid1P10493 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid1P10493 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nid1P10493 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid1P10493 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid1P10493 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nid1P10493 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nid1P10493 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid1P10493 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid1P10493 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nid1P10493 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid1P10493 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nid1P10493 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nid1P10493 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid1P10493 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid1P10493 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nid1P10493 Etf1-202ENSMUST00000180351 108 ntBASIC18.77■□□□□ 0.6
Nid1P10493 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid1P10493 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nid1P10493 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nid1P10493 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nid1P10493 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nid1P10493 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nid1P10493 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nid1P10493 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Nid1P10493 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nid1P10493 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.76■□□□□ 0.59
Nid1P10493 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nid1P10493 Gm9959-201ENSMUST00000068277 390 ntBASIC18.76■□□□□ 0.59
Nid1P10493 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Nid1P10493 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nid1P10493 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nid1P10493 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nid1P10493 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.75■□□□□ 0.59
Nid1P10493 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nid1P10493 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nid1P10493 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nid1P10493 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nid1P10493 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nid1P10493 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms