Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ApoeP08226 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ApoeP08226 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ApoeP08226 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.91■□□□□ 0.62
ApoeP08226 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ApoeP08226 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ApoeP08226 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ApoeP08226 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ApoeP08226 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ApoeP08226 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ApoeP08226 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ApoeP08226 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ApoeP08226 Gm10420-201ENSMUST00000121713 882 ntBASIC18.9■□□□□ 0.62
ApoeP08226 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ApoeP08226 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.9■□□□□ 0.62
ApoeP08226 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ApoeP08226 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ApoeP08226 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ApoeP08226 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.9■□□□□ 0.62
ApoeP08226 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ApoeP08226 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ApoeP08226 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ApoeP08226 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ApoeP08226 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
ApoeP08226 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ApoeP08226 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ApoeP08226 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ApoeP08226 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ApoeP08226 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ApoeP08226 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ApoeP08226 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ApoeP08226 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ApoeP08226 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ApoeP08226 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ApoeP08226 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ApoeP08226 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ApoeP08226 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ApoeP08226 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ApoeP08226 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ApoeP08226 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ApoeP08226 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ApoeP08226 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ApoeP08226 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.88■□□□□ 0.61
ApoeP08226 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ApoeP08226 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.88■□□□□ 0.61
ApoeP08226 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ApoeP08226 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ApoeP08226 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
ApoeP08226 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ApoeP08226 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ApoeP08226 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
ApoeP08226 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ApoeP08226 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ApoeP08226 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ApoeP08226 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ApoeP08226 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ApoeP08226 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ApoeP08226 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ApoeP08226 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ApoeP08226 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ApoeP08226 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ApoeP08226 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ApoeP08226 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ApoeP08226 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ApoeP08226 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ApoeP08226 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ApoeP08226 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ApoeP08226 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ApoeP08226 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ApoeP08226 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ApoeP08226 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ApoeP08226 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ApoeP08226 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ApoeP08226 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ApoeP08226 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ApoeP08226 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ApoeP08226 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ApoeP08226 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ApoeP08226 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ApoeP08226 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ApoeP08226 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ApoeP08226 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ApoeP08226 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ApoeP08226 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ApoeP08226 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
ApoeP08226 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ApoeP08226 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ApoeP08226 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ApoeP08226 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ApoeP08226 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ApoeP08226 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ApoeP08226 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ApoeP08226 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ApoeP08226 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ApoeP08226 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ApoeP08226 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.82■□□□□ 0.6
ApoeP08226 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.82■□□□□ 0.6
ApoeP08226 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.82■□□□□ 0.6
ApoeP08226 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.82■□□□□ 0.6
ApoeP08226 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms