Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hbb-b1P02088 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Hbb-b1P02088 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hbb-b1P02088 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hbb-b1P02088 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hbb-b1P02088 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hbb-b1P02088 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hbb-b1P02088 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hbb-b1P02088 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hbb-b1P02088 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hbb-b1P02088 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hbb-b1P02088 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.16□□□□□ -0.14
Hbb-b1P02088 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hbb-b1P02088 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Hbb-b1P02088 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hbb-b1P02088 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hbb-b1P02088 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hbb-b1P02088 Zfp131-205ENSMUST00000223812 663 ntBASIC14.14□□□□□ -0.15
Hbb-b1P02088 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hbb-b1P02088 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hbb-b1P02088 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hbb-b1P02088 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hbb-b1P02088 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hbb-b1P02088 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hbb-b1P02088 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hbb-b1P02088 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hbb-b1P02088 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hbb-b1P02088 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hbb-b1P02088 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hbb-b1P02088 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hbb-b1P02088 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.13□□□□□ -0.15
Hbb-b1P02088 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hbb-b1P02088 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hbb-b1P02088 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hbb-b1P02088 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hbb-b1P02088 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hbb-b1P02088 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.13□□□□□ -0.15
Hbb-b1P02088 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.13□□□□□ -0.15
Hbb-b1P02088 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hbb-b1P02088 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hbb-b1P02088 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hbb-b1P02088 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hbb-b1P02088 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Hbb-b1P02088 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hbb-b1P02088 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hbb-b1P02088 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hbb-b1P02088 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hbb-b1P02088 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hbb-b1P02088 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Hbb-b1P02088 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.11□□□□□ -0.15
Hbb-b1P02088 Gm9397-201ENSMUST00000200125 605 ntBASIC14.11□□□□□ -0.15
Hbb-b1P02088 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hbb-b1P02088 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hbb-b1P02088 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hbb-b1P02088 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.11□□□□□ -0.15
Hbb-b1P02088 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Hbb-b1P02088 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hbb-b1P02088 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.1□□□□□ -0.15
Hbb-b1P02088 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hbb-b1P02088 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hbb-b1P02088 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hbb-b1P02088 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hbb-b1P02088 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hbb-b1P02088 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hbb-b1P02088 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms