Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.82■□□□□ 0.6
IghmP01872 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.82■□□□□ 0.6
IghmP01872 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IghmP01872 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IghmP01872 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.82■□□□□ 0.6
IghmP01872 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IghmP01872 Gm15820-201ENSMUST00000201566 728 ntBASIC18.82■□□□□ 0.6
IghmP01872 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IghmP01872 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IghmP01872 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
IghmP01872 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
IghmP01872 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IghmP01872 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IghmP01872 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IghmP01872 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IghmP01872 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IghmP01872 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.81■□□□□ 0.6
IghmP01872 Gm9870-201ENSMUST00000063874 645 ntBASIC18.81■□□□□ 0.6
IghmP01872 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IghmP01872 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IghmP01872 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
IghmP01872 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
IghmP01872 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IghmP01872 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IghmP01872 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IghmP01872 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IghmP01872 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
IghmP01872 Gm43530-201ENSMUST00000195920 274 ntBASIC18.8■□□□□ 0.6
IghmP01872 Gm5812-201ENSMUST00000061073 957 ntBASIC18.8■□□□□ 0.6
IghmP01872 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.8■□□□□ 0.6
IghmP01872 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
IghmP01872 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IghmP01872 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IghmP01872 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IghmP01872 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IghmP01872 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IghmP01872 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.79■□□□□ 0.6
IghmP01872 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IghmP01872 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.78■□□□□ 0.6
IghmP01872 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.78■□□□□ 0.6
IghmP01872 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IghmP01872 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
IghmP01872 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
IghmP01872 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IghmP01872 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
IghmP01872 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
IghmP01872 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.77■□□□□ 0.6
IghmP01872 Mir6236-201ENSMUST00000184437 123 ntBASIC18.77■□□□□ 0.6
IghmP01872 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
IghmP01872 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
IghmP01872 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.76■□□□□ 0.59
IghmP01872 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IghmP01872 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IghmP01872 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IghmP01872 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IghmP01872 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
IghmP01872 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
IghmP01872 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IghmP01872 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
IghmP01872 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IghmP01872 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IghmP01872 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IghmP01872 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IghmP01872 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IghmP01872 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IghmP01872 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IghmP01872 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IghmP01872 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.75■□□□□ 0.59
IghmP01872 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.75■□□□□ 0.59
IghmP01872 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IghmP01872 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
IghmP01872 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
IghmP01872 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.75■□□□□ 0.59
IghmP01872 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
IghmP01872 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IghmP01872 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
IghmP01872 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
IghmP01872 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
IghmP01872 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IghmP01872 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
IghmP01872 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
IghmP01872 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IghmP01872 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IghmP01872 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
IghmP01872 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IghmP01872 Gm7417-201ENSMUST00000192950 473 ntBASIC18.74■□□□□ 0.59
IghmP01872 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IghmP01872 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms