Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Vti1aO89116 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vti1aO89116 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vti1aO89116 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vti1aO89116 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Vti1aO89116 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vti1aO89116 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vti1aO89116 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vti1aO89116 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vti1aO89116 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vti1aO89116 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vti1aO89116 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vti1aO89116 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vti1aO89116 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vti1aO89116 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vti1aO89116 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vti1aO89116 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vti1aO89116 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vti1aO89116 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vti1aO89116 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vti1aO89116 Gm43173-201ENSMUST00000202246 593 ntBASIC21.54■■□□□ 1.04
Vti1aO89116 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vti1aO89116 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vti1aO89116 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Vti1aO89116 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.54■■□□□ 1.04
Vti1aO89116 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vti1aO89116 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vti1aO89116 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vti1aO89116 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vti1aO89116 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vti1aO89116 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.53■■□□□ 1.04
Vti1aO89116 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vti1aO89116 Gm43530-201ENSMUST00000195920 274 ntBASIC21.53■■□□□ 1.04
Vti1aO89116 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vti1aO89116 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vti1aO89116 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vti1aO89116 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vti1aO89116 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vti1aO89116 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vti1aO89116 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.52■■□□□ 1.04
Vti1aO89116 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vti1aO89116 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.04
Vti1aO89116 Gm12251-201ENSMUST00000117893 792 ntBASIC21.52■■□□□ 1.04
Vti1aO89116 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.52■■□□□ 1.04
Vti1aO89116 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.52■■□□□ 1.04
Vti1aO89116 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vti1aO89116 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vti1aO89116 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vti1aO89116 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vti1aO89116 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vti1aO89116 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Vti1aO89116 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
Vti1aO89116 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.51■■□□□ 1.03
Vti1aO89116 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vti1aO89116 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vti1aO89116 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Vti1aO89116 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vti1aO89116 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vti1aO89116 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vti1aO89116 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Gm26833-201ENSMUST00000180899 440 ntBASIC21.5■■□□□ 1.03
Vti1aO89116 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.5■■□□□ 1.03
Vti1aO89116 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vti1aO89116 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Vti1aO89116 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vti1aO89116 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vti1aO89116 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vti1aO89116 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vti1aO89116 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.49■■□□□ 1.03
Vti1aO89116 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vti1aO89116 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vti1aO89116 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Vti1aO89116 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vti1aO89116 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Vti1aO89116 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vti1aO89116 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.48■■□□□ 1.03
Vti1aO89116 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.48■■□□□ 1.03
Vti1aO89116 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
Vti1aO89116 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.48■■□□□ 1.03
Vti1aO89116 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
Vti1aO89116 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Vti1aO89116 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vti1aO89116 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vti1aO89116 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vti1aO89116 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vti1aO89116 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.47■■□□□ 1.03
Vti1aO89116 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vti1aO89116 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vti1aO89116 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms