Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Becn1O88597 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC22.74■■□□□ 1.23
Becn1O88597 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Becn1O88597 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Becn1O88597 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Becn1O88597 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Becn1O88597 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Becn1O88597 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Becn1O88597 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Becn1O88597 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC22.73■■□□□ 1.23
Becn1O88597 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Becn1O88597 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Becn1O88597 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Becn1O88597 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC22.73■■□□□ 1.23
Becn1O88597 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.73■■□□□ 1.23
Becn1O88597 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Becn1O88597 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Becn1O88597 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.73■■□□□ 1.23
Becn1O88597 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Becn1O88597 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Becn1O88597 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Becn1O88597 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Becn1O88597 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Becn1O88597 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Becn1O88597 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Becn1O88597 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Becn1O88597 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Becn1O88597 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.72■■□□□ 1.23
Becn1O88597 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Becn1O88597 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Becn1O88597 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Becn1O88597 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Becn1O88597 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Becn1O88597 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Becn1O88597 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Becn1O88597 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Becn1O88597 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Becn1O88597 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Becn1O88597 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
Becn1O88597 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Becn1O88597 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Becn1O88597 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Becn1O88597 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Becn1O88597 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Becn1O88597 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
Becn1O88597 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Becn1O88597 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Becn1O88597 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Becn1O88597 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.7■■□□□ 1.22
Becn1O88597 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Becn1O88597 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Becn1O88597 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Becn1O88597 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Becn1O88597 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC22.69■■□□□ 1.22
Becn1O88597 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Becn1O88597 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Becn1O88597 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Becn1O88597 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Becn1O88597 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.69■■□□□ 1.22
Becn1O88597 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC22.69■■□□□ 1.22
Becn1O88597 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Becn1O88597 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC22.68■■□□□ 1.22
Becn1O88597 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Becn1O88597 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Becn1O88597 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
Becn1O88597 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Becn1O88597 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Becn1O88597 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC22.68■■□□□ 1.22
Becn1O88597 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Becn1O88597 Golph3-205ENSMUST00000228671 2842 ntBASIC22.68■■□□□ 1.22
Becn1O88597 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Becn1O88597 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Becn1O88597 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Becn1O88597 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Becn1O88597 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Becn1O88597 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Becn1O88597 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Becn1O88597 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Becn1O88597 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Becn1O88597 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Becn1O88597 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Becn1O88597 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Becn1O88597 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Becn1O88597 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Becn1O88597 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Becn1O88597 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Becn1O88597 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Becn1O88597 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC22.66■■□□□ 1.22
Becn1O88597 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Becn1O88597 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Becn1O88597 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.65■■□□□ 1.22
Becn1O88597 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Becn1O88597 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Becn1O88597 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Becn1O88597 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.65■■□□□ 1.22
Becn1O88597 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Becn1O88597 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Becn1O88597 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.64■■□□□ 1.21
Becn1O88597 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Becn1O88597 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms