Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC26.54■■□□□ 1.84
Ubr1O70481 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ubr1O70481 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC26.54■■□□□ 1.84
Ubr1O70481 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ubr1O70481 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ubr1O70481 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC26.54■■□□□ 1.84
Ubr1O70481 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ubr1O70481 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ubr1O70481 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ubr1O70481 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC26.53■■□□□ 1.84
Ubr1O70481 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ubr1O70481 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ubr1O70481 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Ubr1O70481 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ubr1O70481 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Ubr1O70481 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ubr1O70481 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Ubr1O70481 AC137127.1-201ENSMUST00000213466 1078 ntBASIC26.51■■□□□ 1.83
Ubr1O70481 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Ubr1O70481 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ubr1O70481 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ubr1O70481 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ubr1O70481 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC26.51■■□□□ 1.83
Ubr1O70481 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr1O70481 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr1O70481 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr1O70481 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr1O70481 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr1O70481 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr1O70481 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr1O70481 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC26.5■■□□□ 1.83
Ubr1O70481 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr1O70481 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Ubr1O70481 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ubr1O70481 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ubr1O70481 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC26.48■■□□□ 1.83
Ubr1O70481 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ubr1O70481 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
Ubr1O70481 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ubr1O70481 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ubr1O70481 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ubr1O70481 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ubr1O70481 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC26.47■■□□□ 1.83
Ubr1O70481 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC26.47■■□□□ 1.83
Ubr1O70481 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ubr1O70481 Ap3s1-204ENSMUST00000225520 957 ntBASIC26.47■■□□□ 1.83
Ubr1O70481 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Ubr1O70481 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ubr1O70481 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Ubr1O70481 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ubr1O70481 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ubr1O70481 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ubr1O70481 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Ubr1O70481 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC26.46■■□□□ 1.83
Ubr1O70481 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Ubr1O70481 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC26.46■■□□□ 1.83
Ubr1O70481 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC26.46■■□□□ 1.83
Ubr1O70481 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Ubr1O70481 Reep4-203ENSMUST00000226563 1444 ntBASIC26.45■■□□□ 1.83
Ubr1O70481 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ubr1O70481 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ubr1O70481 CT025689.6-201ENSMUST00000224991 1104 ntBASIC26.45■■□□□ 1.82
Ubr1O70481 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr1O70481 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr1O70481 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC26.44■■□□□ 1.82
Ubr1O70481 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Ubr1O70481 Gm13234-201ENSMUST00000120010 747 ntBASIC26.44■■□□□ 1.82
Ubr1O70481 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC26.44■■□□□ 1.82
Ubr1O70481 CT030146.1-201ENSMUST00000220919 217 ntBASIC26.44■■□□□ 1.82
Ubr1O70481 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr1O70481 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr1O70481 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr1O70481 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr1O70481 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr1O70481 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ubr1O70481 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ubr1O70481 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ubr1O70481 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
Ubr1O70481 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC26.43■■□□□ 1.82
Ubr1O70481 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ubr1O70481 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ubr1O70481 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ubr1O70481 Gm10571-201ENSMUST00000097869 1638 ntBASIC26.42■■□□□ 1.82
Ubr1O70481 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC26.42■■□□□ 1.82
Ubr1O70481 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ubr1O70481 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ubr1O70481 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ubr1O70481 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ubr1O70481 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC26.42■■□□□ 1.82
Ubr1O70481 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ubr1O70481 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Ubr1O70481 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC26.41■■□□□ 1.82
Ubr1O70481 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Ubr1O70481 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ubr1O70481 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Ubr1O70481 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC26.41■■□□□ 1.82
Ubr1O70481 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC26.41■■□□□ 1.82
Ubr1O70481 Gm32051-202ENSMUST00000197905 2385 ntBASIC26.4■■□□□ 1.82
Ubr1O70481 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26.4■■□□□ 1.82
Ubr1O70481 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms