Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.8■□□□□ 0.76
Pdlim1O70400 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim1O70400 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim1O70400 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.79■□□□□ 0.76
Pdlim1O70400 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim1O70400 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim1O70400 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim1O70400 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim1O70400 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim1O70400 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim1O70400 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pdlim1O70400 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim1O70400 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim1O70400 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pdlim1O70400 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim1O70400 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.77■□□□□ 0.76
Pdlim1O70400 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim1O70400 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Pdlim1O70400 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim1O70400 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Pdlim1O70400 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.77■□□□□ 0.76
Pdlim1O70400 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Pdlim1O70400 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim1O70400 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim1O70400 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.76■□□□□ 0.75
Pdlim1O70400 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pdlim1O70400 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim1O70400 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim1O70400 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim1O70400 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.76■□□□□ 0.75
Pdlim1O70400 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.76■□□□□ 0.75
Pdlim1O70400 Gm43137-201ENSMUST00000198052 594 ntBASIC19.76■□□□□ 0.75
Pdlim1O70400 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim1O70400 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim1O70400 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim1O70400 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim1O70400 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim1O70400 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim1O70400 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim1O70400 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim1O70400 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pdlim1O70400 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pdlim1O70400 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim1O70400 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim1O70400 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim1O70400 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim1O70400 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim1O70400 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim1O70400 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim1O70400 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim1O70400 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim1O70400 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim1O70400 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.74■□□□□ 0.75
Pdlim1O70400 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pdlim1O70400 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.74■□□□□ 0.75
Pdlim1O70400 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.74■□□□□ 0.75
Pdlim1O70400 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim1O70400 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim1O70400 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Pdlim1O70400 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdlim1O70400 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdlim1O70400 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.73■□□□□ 0.75
Pdlim1O70400 Gm27454-201ENSMUST00000185090 204 ntBASIC19.73■□□□□ 0.75
Pdlim1O70400 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pdlim1O70400 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pdlim1O70400 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pdlim1O70400 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pdlim1O70400 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.72■□□□□ 0.75
Pdlim1O70400 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.72■□□□□ 0.75
Pdlim1O70400 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pdlim1O70400 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim1O70400 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Pdlim1O70400 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.71■□□□□ 0.75
Pdlim1O70400 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim1O70400 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim1O70400 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim1O70400 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim1O70400 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.71■□□□□ 0.75
Pdlim1O70400 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim1O70400 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim1O70400 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pdlim1O70400 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pdlim1O70400 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim1O70400 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim1O70400 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim1O70400 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdlim1O70400 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdlim1O70400 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdlim1O70400 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Pdlim1O70400 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdlim1O70400 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdlim1O70400 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdlim1O70400 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.7■□□□□ 0.74
Pdlim1O70400 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pdlim1O70400 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdlim1O70400 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pdlim1O70400 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.69■□□□□ 0.74
Pdlim1O70400 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdlim1O70400 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdlim1O70400 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms