Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.13■□□□□ 0.49
Pdlim3O70209 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim3O70209 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim3O70209 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim3O70209 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim3O70209 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim3O70209 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim3O70209 Mir6538-201ENSMUST00000183713 110 ntBASIC18.12■□□□□ 0.49
Pdlim3O70209 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Pdlim3O70209 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pdlim3O70209 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim3O70209 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.12■□□□□ 0.49
Pdlim3O70209 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.12■□□□□ 0.49
Pdlim3O70209 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim3O70209 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdlim3O70209 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.12■□□□□ 0.49
Pdlim3O70209 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim3O70209 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim3O70209 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Pdlim3O70209 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim3O70209 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim3O70209 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim3O70209 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim3O70209 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim3O70209 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim3O70209 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdlim3O70209 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim3O70209 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim3O70209 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim3O70209 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pdlim3O70209 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pdlim3O70209 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim3O70209 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pdlim3O70209 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim3O70209 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdlim3O70209 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.1■□□□□ 0.49
Pdlim3O70209 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.1■□□□□ 0.49
Pdlim3O70209 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim3O70209 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.09■□□□□ 0.49
Pdlim3O70209 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim3O70209 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pdlim3O70209 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.09■□□□□ 0.49
Pdlim3O70209 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim3O70209 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim3O70209 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim3O70209 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdlim3O70209 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pdlim3O70209 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pdlim3O70209 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pdlim3O70209 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdlim3O70209 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdlim3O70209 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdlim3O70209 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdlim3O70209 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdlim3O70209 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.07■□□□□ 0.48
Pdlim3O70209 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.07■□□□□ 0.48
Pdlim3O70209 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Pdlim3O70209 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.07■□□□□ 0.48
Pdlim3O70209 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim3O70209 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.06■□□□□ 0.48
Pdlim3O70209 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pdlim3O70209 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pdlim3O70209 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim3O70209 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pdlim3O70209 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim3O70209 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim3O70209 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim3O70209 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.05■□□□□ 0.48
Pdlim3O70209 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pdlim3O70209 Gm45444-201ENSMUST00000211394 898 ntBASIC18.05■□□□□ 0.48
Pdlim3O70209 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim3O70209 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.04■□□□□ 0.48
Pdlim3O70209 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim3O70209 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms