Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Alx3O70137 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Alx3O70137 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx3O70137 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx3O70137 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.1■□□□□ 0.49
Alx3O70137 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx3O70137 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx3O70137 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Alx3O70137 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Alx3O70137 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx3O70137 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx3O70137 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Alx3O70137 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx3O70137 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.1■□□□□ 0.49
Alx3O70137 Gm7143-201ENSMUST00000222811 859 ntBASIC18.1■□□□□ 0.49
Alx3O70137 Gm40881-201ENSMUST00000223397 166 ntBASIC18.1■□□□□ 0.49
Alx3O70137 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx3O70137 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx3O70137 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Alx3O70137 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alx3O70137 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.09■□□□□ 0.49
Alx3O70137 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alx3O70137 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Alx3O70137 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Alx3O70137 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Alx3O70137 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Alx3O70137 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Alx3O70137 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Alx3O70137 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Alx3O70137 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Alx3O70137 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Alx3O70137 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.08■□□□□ 0.49
Alx3O70137 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Alx3O70137 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.08■□□□□ 0.48
Alx3O70137 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Alx3O70137 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Alx3O70137 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx3O70137 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx3O70137 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Alx3O70137 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.07■□□□□ 0.48
Alx3O70137 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Alx3O70137 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx3O70137 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Alx3O70137 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Alx3O70137 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.07■□□□□ 0.48
Alx3O70137 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Alx3O70137 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx3O70137 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Alx3O70137 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.06■□□□□ 0.48
Alx3O70137 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Alx3O70137 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.06■□□□□ 0.48
Alx3O70137 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx3O70137 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.06■□□□□ 0.48
Alx3O70137 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx3O70137 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.06■□□□□ 0.48
Alx3O70137 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx3O70137 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Alx3O70137 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.06■□□□□ 0.48
Alx3O70137 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx3O70137 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Alx3O70137 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx3O70137 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx3O70137 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.05■□□□□ 0.48
Alx3O70137 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Alx3O70137 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.05■□□□□ 0.48
Alx3O70137 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Alx3O70137 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx3O70137 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx3O70137 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx3O70137 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.05■□□□□ 0.48
Alx3O70137 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Alx3O70137 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx3O70137 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Alx3O70137 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx3O70137 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx3O70137 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Alx3O70137 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx3O70137 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.04■□□□□ 0.48
Alx3O70137 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx3O70137 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx3O70137 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx3O70137 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx3O70137 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Alx3O70137 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.03■□□□□ 0.48
Alx3O70137 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx3O70137 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx3O70137 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.03■□□□□ 0.48
Alx3O70137 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx3O70137 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Alx3O70137 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx3O70137 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx3O70137 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx3O70137 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx3O70137 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx3O70137 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx3O70137 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx3O70137 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Alx3O70137 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Alx3O70137 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Alx3O70137 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms