Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6dO55057 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6dO55057 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pde6dO55057 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6dO55057 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6dO55057 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6dO55057 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6dO55057 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.78■□□□□ 0.12
Pde6dO55057 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6dO55057 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6dO55057 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6dO55057 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Pde6dO55057 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6dO55057 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pde6dO55057 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6dO55057 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6dO55057 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6dO55057 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pde6dO55057 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pde6dO55057 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pde6dO55057 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pde6dO55057 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
Pde6dO55057 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pde6dO55057 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pde6dO55057 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6dO55057 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6dO55057 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6dO55057 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.76■□□□□ 0.11
Pde6dO55057 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6dO55057 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6dO55057 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6dO55057 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pde6dO55057 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pde6dO55057 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.75■□□□□ 0.11
Pde6dO55057 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pde6dO55057 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pde6dO55057 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
Pde6dO55057 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pde6dO55057 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pde6dO55057 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pde6dO55057 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pde6dO55057 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pde6dO55057 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pde6dO55057 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pde6dO55057 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pde6dO55057 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pde6dO55057 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pde6dO55057 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pde6dO55057 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pde6dO55057 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pde6dO55057 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.74■□□□□ 0.11
Pde6dO55057 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pde6dO55057 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pde6dO55057 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pde6dO55057 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pde6dO55057 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pde6dO55057 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pde6dO55057 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.74■□□□□ 0.11
Pde6dO55057 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pde6dO55057 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pde6dO55057 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pde6dO55057 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pde6dO55057 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pde6dO55057 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Pde6dO55057 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pde6dO55057 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pde6dO55057 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pde6dO55057 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pde6dO55057 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pde6dO55057 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.72■□□□□ 0.11
Pde6dO55057 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6dO55057 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6dO55057 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6dO55057 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6dO55057 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6dO55057 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6dO55057 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6dO55057 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6dO55057 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.72■□□□□ 0.11
Pde6dO55057 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pde6dO55057 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6dO55057 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.72■□□□□ 0.11
Pde6dO55057 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pde6dO55057 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6dO55057 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6dO55057 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Pde6dO55057 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.71■□□□□ 0.11
Pde6dO55057 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.71■□□□□ 0.11
Pde6dO55057 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.71■□□□□ 0.11
Pde6dO55057 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Pde6dO55057 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Pde6dO55057 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pde6dO55057 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Pde6dO55057 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pde6dO55057 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pde6dO55057 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6dO55057 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6dO55057 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pde6dO55057 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6dO55057 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms