Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.12■□□□□ 0.49
Rnf13O54965 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf13O54965 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rnf13O54965 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rnf13O54965 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf13O54965 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.12■□□□□ 0.49
Rnf13O54965 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Rnf13O54965 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf13O54965 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rnf13O54965 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf13O54965 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf13O54965 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf13O54965 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.11■□□□□ 0.49
Rnf13O54965 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.11■□□□□ 0.49
Rnf13O54965 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf13O54965 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Rnf13O54965 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Rnf13O54965 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf13O54965 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf13O54965 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.1■□□□□ 0.49
Rnf13O54965 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf13O54965 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf13O54965 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf13O54965 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf13O54965 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.1■□□□□ 0.49
Rnf13O54965 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf13O54965 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf13O54965 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.1■□□□□ 0.49
Rnf13O54965 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf13O54965 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf13O54965 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf13O54965 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf13O54965 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf13O54965 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf13O54965 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf13O54965 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf13O54965 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Rnf13O54965 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf13O54965 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf13O54965 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf13O54965 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf13O54965 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf13O54965 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf13O54965 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.08■□□□□ 0.48
Rnf13O54965 Gm45444-201ENSMUST00000211394 898 ntBASIC18.08■□□□□ 0.48
Rnf13O54965 Cap2-205ENSMUST00000225824 1634 ntBASIC18.08■□□□□ 0.48
Rnf13O54965 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf13O54965 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf13O54965 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rnf13O54965 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rnf13O54965 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.07■□□□□ 0.48
Rnf13O54965 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.07■□□□□ 0.48
Rnf13O54965 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.07■□□□□ 0.48
Rnf13O54965 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rnf13O54965 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf13O54965 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf13O54965 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf13O54965 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf13O54965 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf13O54965 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Rnf13O54965 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf13O54965 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf13O54965 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf13O54965 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Rnf13O54965 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.05■□□□□ 0.48
Rnf13O54965 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf13O54965 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rnf13O54965 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf13O54965 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf13O54965 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.04■□□□□ 0.48
Rnf13O54965 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.04■□□□□ 0.48
Rnf13O54965 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.04■□□□□ 0.48
Rnf13O54965 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf13O54965 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf13O54965 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf13O54965 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf13O54965 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf13O54965 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf13O54965 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf13O54965 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rnf13O54965 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf13O54965 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.03■□□□□ 0.48
Rnf13O54965 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf13O54965 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf13O54965 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf13O54965 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf13O54965 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms