Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ChkaO54804 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.25■□□□□ 0.83
ChkaO54804 Gm15820-201ENSMUST00000201566 728 ntBASIC20.25■□□□□ 0.83
ChkaO54804 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ChkaO54804 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ChkaO54804 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ChkaO54804 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ChkaO54804 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ChkaO54804 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ChkaO54804 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ChkaO54804 Iqck-206ENSMUST00000208658 2891 ntBASIC20.24■□□□□ 0.83
ChkaO54804 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.24■□□□□ 0.83
ChkaO54804 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.24■□□□□ 0.83
ChkaO54804 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ChkaO54804 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ChkaO54804 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ChkaO54804 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ChkaO54804 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ChkaO54804 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ChkaO54804 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ChkaO54804 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.23■□□□□ 0.83
ChkaO54804 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ChkaO54804 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ChkaO54804 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.22■□□□□ 0.83
ChkaO54804 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ChkaO54804 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ChkaO54804 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.22■□□□□ 0.83
ChkaO54804 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
ChkaO54804 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ChkaO54804 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ChkaO54804 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ChkaO54804 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ChkaO54804 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ChkaO54804 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ChkaO54804 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ChkaO54804 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ChkaO54804 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ChkaO54804 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ChkaO54804 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ChkaO54804 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ChkaO54804 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ChkaO54804 Gm15546-201ENSMUST00000122095 826 ntBASIC20.2■□□□□ 0.82
ChkaO54804 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.2■□□□□ 0.82
ChkaO54804 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ChkaO54804 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ChkaO54804 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ChkaO54804 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ChkaO54804 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ChkaO54804 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.19■□□□□ 0.82
ChkaO54804 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ChkaO54804 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ChkaO54804 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ChkaO54804 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ChkaO54804 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.19■□□□□ 0.82
ChkaO54804 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ChkaO54804 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ChkaO54804 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ChkaO54804 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ChkaO54804 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.18■□□□□ 0.82
ChkaO54804 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ChkaO54804 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ChkaO54804 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ChkaO54804 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ChkaO54804 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ChkaO54804 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ChkaO54804 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ChkaO54804 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ChkaO54804 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.17■□□□□ 0.82
ChkaO54804 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ChkaO54804 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ChkaO54804 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ChkaO54804 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ChkaO54804 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ChkaO54804 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ChkaO54804 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ChkaO54804 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ChkaO54804 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
ChkaO54804 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ChkaO54804 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.17■□□□□ 0.82
ChkaO54804 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ChkaO54804 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ChkaO54804 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ChkaO54804 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
ChkaO54804 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.16■□□□□ 0.82
ChkaO54804 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ChkaO54804 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
ChkaO54804 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.16■□□□□ 0.82
ChkaO54804 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ChkaO54804 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ChkaO54804 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ChkaO54804 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ChkaO54804 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ChkaO54804 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ChkaO54804 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ChkaO54804 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
ChkaO54804 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.14■□□□□ 0.81
ChkaO54804 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ChkaO54804 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ChkaO54804 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ChkaO54804 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms