Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nr1i3O35627 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Nr1i3O35627 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nr1i3O35627 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nr1i3O35627 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nr1i3O35627 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nr1i3O35627 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1i3O35627 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1i3O35627 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Nr1i3O35627 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1i3O35627 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1i3O35627 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1i3O35627 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Nr1i3O35627 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1i3O35627 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1i3O35627 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Nr1i3O35627 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1i3O35627 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1i3O35627 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.56■■□□□ 1.04
Nr1i3O35627 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1i3O35627 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.56■■□□□ 1.04
Nr1i3O35627 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Nr1i3O35627 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1i3O35627 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Nr1i3O35627 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.55■■□□□ 1.04
Nr1i3O35627 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1i3O35627 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1i3O35627 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1i3O35627 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.55■■□□□ 1.04
Nr1i3O35627 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1i3O35627 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Nr1i3O35627 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1i3O35627 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1i3O35627 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1i3O35627 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1i3O35627 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nr1i3O35627 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nr1i3O35627 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.54■■□□□ 1.04
Nr1i3O35627 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nr1i3O35627 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nr1i3O35627 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nr1i3O35627 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nr1i3O35627 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Nr1i3O35627 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nr1i3O35627 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nr1i3O35627 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nr1i3O35627 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.53■■□□□ 1.04
Nr1i3O35627 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.53■■□□□ 1.04
Nr1i3O35627 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nr1i3O35627 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nr1i3O35627 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.53■■□□□ 1.04
Nr1i3O35627 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nr1i3O35627 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nr1i3O35627 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nr1i3O35627 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.52■■□□□ 1.04
Nr1i3O35627 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nr1i3O35627 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nr1i3O35627 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nr1i3O35627 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nr1i3O35627 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nr1i3O35627 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nr1i3O35627 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nr1i3O35627 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nr1i3O35627 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Nr1i3O35627 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nr1i3O35627 Golph3-202ENSMUST00000226517 2359 ntBASIC21.51■■□□□ 1.03
Nr1i3O35627 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nr1i3O35627 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nr1i3O35627 Gm5812-201ENSMUST00000061073 957 ntBASIC21.51■■□□□ 1.03
Nr1i3O35627 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nr1i3O35627 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Nr1i3O35627 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1i3O35627 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1i3O35627 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1i3O35627 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
Nr1i3O35627 Gm7417-201ENSMUST00000192950 473 ntBASIC21.5■■□□□ 1.03
Nr1i3O35627 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1i3O35627 Gm15820-201ENSMUST00000201566 728 ntBASIC21.5■■□□□ 1.03
Nr1i3O35627 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1i3O35627 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1i3O35627 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1i3O35627 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1i3O35627 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Nr1i3O35627 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1i3O35627 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1i3O35627 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Nr1i3O35627 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1i3O35627 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nr1i3O35627 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nr1i3O35627 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nr1i3O35627 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nr1i3O35627 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
Nr1i3O35627 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.49■■□□□ 1.03
Nr1i3O35627 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nr1i3O35627 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nr1i3O35627 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Nr1i3O35627 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nr1i3O35627 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.48■■□□□ 1.03
Nr1i3O35627 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Nr1i3O35627 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms