Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1O35604 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1O35604 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1O35604 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.5■□□□□ 0.71
Npc1O35604 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1O35604 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1O35604 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Npc1O35604 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1O35604 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.49■□□□□ 0.71
Npc1O35604 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.49■□□□□ 0.71
Npc1O35604 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1O35604 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1O35604 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1O35604 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1O35604 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Npc1O35604 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1O35604 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Npc1O35604 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.47■□□□□ 0.71
Npc1O35604 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1O35604 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1O35604 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Npc1O35604 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Npc1O35604 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Npc1O35604 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1O35604 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Npc1O35604 Gm45417-201ENSMUST00000209533 758 ntBASIC19.47■□□□□ 0.71
Npc1O35604 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1O35604 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Npc1O35604 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1O35604 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1O35604 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1O35604 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1O35604 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1O35604 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1O35604 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.46■□□□□ 0.71
Npc1O35604 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1O35604 Gm43137-201ENSMUST00000198052 594 ntBASIC19.46■□□□□ 0.71
Npc1O35604 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Npc1O35604 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1O35604 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Npc1O35604 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Npc1O35604 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npc1O35604 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Npc1O35604 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npc1O35604 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.45■□□□□ 0.7
Npc1O35604 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.45■□□□□ 0.7
Npc1O35604 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npc1O35604 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npc1O35604 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npc1O35604 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npc1O35604 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1O35604 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Npc1O35604 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1O35604 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Npc1O35604 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1O35604 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1O35604 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.44■□□□□ 0.7
Npc1O35604 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.44■□□□□ 0.7
Npc1O35604 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1O35604 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1O35604 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Npc1O35604 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1O35604 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1O35604 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1O35604 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1O35604 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1O35604 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npc1O35604 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1O35604 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Npc1O35604 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1O35604 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1O35604 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Npc1O35604 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.43■□□□□ 0.7
Npc1O35604 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Npc1O35604 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1O35604 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Npc1O35604 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Npc1O35604 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1O35604 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1O35604 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1O35604 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1O35604 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1O35604 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1O35604 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1O35604 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1O35604 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npc1O35604 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Npc1O35604 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms