Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc1a6O35544 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.73■□□□□ 0.75
Slc1a6O35544 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc1a6O35544 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc1a6O35544 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc1a6O35544 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc1a6O35544 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.72■□□□□ 0.75
Slc1a6O35544 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.72■□□□□ 0.75
Slc1a6O35544 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.72■□□□□ 0.75
Slc1a6O35544 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a6O35544 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc1a6O35544 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc1a6O35544 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc1a6O35544 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc1a6O35544 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc1a6O35544 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc1a6O35544 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc1a6O35544 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.71■□□□□ 0.75
Slc1a6O35544 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Slc1a6O35544 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc1a6O35544 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Slc1a6O35544 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Slc1a6O35544 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Slc1a6O35544 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a6O35544 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.7■□□□□ 0.74
Slc1a6O35544 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a6O35544 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a6O35544 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.7■□□□□ 0.74
Slc1a6O35544 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a6O35544 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Slc1a6O35544 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a6O35544 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a6O35544 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc1a6O35544 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc1a6O35544 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc1a6O35544 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Slc1a6O35544 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Slc1a6O35544 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc1a6O35544 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Slc1a6O35544 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc1a6O35544 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc1a6O35544 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.69■□□□□ 0.74
Slc1a6O35544 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a6O35544 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a6O35544 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Slc1a6O35544 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a6O35544 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a6O35544 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a6O35544 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a6O35544 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a6O35544 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.68■□□□□ 0.74
Slc1a6O35544 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a6O35544 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a6O35544 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
Slc1a6O35544 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a6O35544 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a6O35544 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a6O35544 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc1a6O35544 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc1a6O35544 Mir6538-201ENSMUST00000183713 110 ntBASIC19.67■□□□□ 0.74
Slc1a6O35544 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Slc1a6O35544 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc1a6O35544 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc1a6O35544 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.67■□□□□ 0.74
Slc1a6O35544 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.67■□□□□ 0.74
Slc1a6O35544 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc1a6O35544 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Slc1a6O35544 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc1a6O35544 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc1a6O35544 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slc1a6O35544 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a6O35544 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a6O35544 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a6O35544 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a6O35544 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a6O35544 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a6O35544 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.66■□□□□ 0.74
Slc1a6O35544 Gm45444-201ENSMUST00000211394 898 ntBASIC19.66■□□□□ 0.74
Slc1a6O35544 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a6O35544 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a6O35544 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a6O35544 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a6O35544 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a6O35544 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Slc1a6O35544 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a6O35544 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.65■□□□□ 0.74
Slc1a6O35544 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a6O35544 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms