Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Capn1O35350 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Capn1O35350 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Capn1O35350 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Capn1O35350 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capn1O35350 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capn1O35350 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.4■□□□□ 0.54
Capn1O35350 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.4■□□□□ 0.54
Capn1O35350 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Capn1O35350 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.4■□□□□ 0.54
Capn1O35350 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Capn1O35350 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capn1O35350 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capn1O35350 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.4■□□□□ 0.54
Capn1O35350 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Capn1O35350 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Capn1O35350 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capn1O35350 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capn1O35350 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.4■□□□□ 0.54
Capn1O35350 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Capn1O35350 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Capn1O35350 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Capn1O35350 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Capn1O35350 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Capn1O35350 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Capn1O35350 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Capn1O35350 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Capn1O35350 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Capn1O35350 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Capn1O35350 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Capn1O35350 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Capn1O35350 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capn1O35350 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capn1O35350 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Capn1O35350 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Capn1O35350 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capn1O35350 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.38■□□□□ 0.53
Capn1O35350 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Capn1O35350 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Capn1O35350 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Capn1O35350 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capn1O35350 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Capn1O35350 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capn1O35350 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capn1O35350 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capn1O35350 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Capn1O35350 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Capn1O35350 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Capn1O35350 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Capn1O35350 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.37■□□□□ 0.53
Capn1O35350 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.37■□□□□ 0.53
Capn1O35350 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Capn1O35350 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Capn1O35350 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.37■□□□□ 0.53
Capn1O35350 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Capn1O35350 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Capn1O35350 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Capn1O35350 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Capn1O35350 Gm43017-201ENSMUST00000198296 752 ntBASIC18.36■□□□□ 0.53
Capn1O35350 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.36■□□□□ 0.53
Capn1O35350 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Capn1O35350 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.36■□□□□ 0.53
Capn1O35350 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Capn1O35350 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Capn1O35350 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Capn1O35350 Gm18284-201ENSMUST00000172604 624 ntBASIC18.35■□□□□ 0.53
Capn1O35350 Gm8495-201ENSMUST00000188740 694 ntBASIC18.35■□□□□ 0.53
Capn1O35350 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.35■□□□□ 0.53
Capn1O35350 Gm8493-201ENSMUST00000196881 489 ntBASIC18.35■□□□□ 0.53
Capn1O35350 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Capn1O35350 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Capn1O35350 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capn1O35350 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capn1O35350 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capn1O35350 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Capn1O35350 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Capn1O35350 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.34■□□□□ 0.53
Capn1O35350 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capn1O35350 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Capn1O35350 Gm43530-201ENSMUST00000195920 274 ntBASIC18.34■□□□□ 0.53
Capn1O35350 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capn1O35350 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.34■□□□□ 0.53
Capn1O35350 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Capn1O35350 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capn1O35350 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Capn1O35350 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capn1O35350 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Capn1O35350 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capn1O35350 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.34■□□□□ 0.53
Capn1O35350 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Capn1O35350 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capn1O35350 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.53
Capn1O35350 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Capn1O35350 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Capn1O35350 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Capn1O35350 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Capn1O35350 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Capn1O35350 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Capn1O35350 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Capn1O35350 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms