Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.53■□□□□ 0.88
Ercc2O08811 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ercc2O08811 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc2O08811 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Ercc2O08811 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc2O08811 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc2O08811 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc2O08811 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc2O08811 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc2O08811 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ercc2O08811 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc2O08811 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc2O08811 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.51■□□□□ 0.87
Ercc2O08811 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc2O08811 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc2O08811 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc2O08811 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc2O08811 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.51■□□□□ 0.87
Ercc2O08811 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.51■□□□□ 0.87
Ercc2O08811 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc2O08811 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ercc2O08811 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc2O08811 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc2O08811 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc2O08811 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ercc2O08811 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ercc2O08811 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ercc2O08811 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ercc2O08811 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.5■□□□□ 0.87
Ercc2O08811 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.5■□□□□ 0.87
Ercc2O08811 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Ercc2O08811 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ercc2O08811 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ercc2O08811 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.5■□□□□ 0.87
Ercc2O08811 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ercc2O08811 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ercc2O08811 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ercc2O08811 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ercc2O08811 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ercc2O08811 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ercc2O08811 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.49■□□□□ 0.87
Ercc2O08811 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ercc2O08811 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ercc2O08811 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ercc2O08811 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Ercc2O08811 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ercc2O08811 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ercc2O08811 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.48■□□□□ 0.87
Ercc2O08811 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ercc2O08811 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ercc2O08811 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ercc2O08811 Gm21956-201ENSMUST00000179946 522 ntBASIC20.48■□□□□ 0.87
Ercc2O08811 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.48■□□□□ 0.87
Ercc2O08811 Gm13241-201ENSMUST00000094493 780 ntBASIC20.48■□□□□ 0.87
Ercc2O08811 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ercc2O08811 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ercc2O08811 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ercc2O08811 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ercc2O08811 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ercc2O08811 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.47■□□□□ 0.87
Ercc2O08811 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Ercc2O08811 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.47■□□□□ 0.87
Ercc2O08811 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ercc2O08811 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.46■□□□□ 0.87
Ercc2O08811 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Ercc2O08811 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ercc2O08811 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ercc2O08811 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ercc2O08811 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ercc2O08811 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ercc2O08811 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Ercc2O08811 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Ercc2O08811 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ercc2O08811 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ercc2O08811 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.45■□□□□ 0.86
Ercc2O08811 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ercc2O08811 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ercc2O08811 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ercc2O08811 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ercc2O08811 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ercc2O08811 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ercc2O08811 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.44■□□□□ 0.86
Ercc2O08811 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ercc2O08811 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.44■□□□□ 0.86
Ercc2O08811 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ercc2O08811 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ercc2O08811 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ercc2O08811 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ercc2O08811 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ercc2O08811 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ercc2O08811 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ercc2O08811 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ercc2O08811 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ercc2O08811 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ercc2O08811 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.43■□□□□ 0.86
Ercc2O08811 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.43■□□□□ 0.86
Ercc2O08811 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ercc2O08811 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ercc2O08811 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ercc2O08811 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms