Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
Gm21788J3QNH3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm21788J3QNH3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm21788J3QNH3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm21788J3QNH3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.89■□□□□ 0.29
Gm21788J3QNH3 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.89■□□□□ 0.29
Gm21788J3QNH3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gm21788J3QNH3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm21788J3QNH3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm21788J3QNH3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm21788J3QNH3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm21788J3QNH3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Gm21788J3QNH3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm21788J3QNH3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Gm21788J3QNH3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm21788J3QNH3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm21788J3QNH3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm21788J3QNH3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm21788J3QNH3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm21788J3QNH3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm21788J3QNH3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.86■□□□□ 0.29
Gm21788J3QNH3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Gm21788J3QNH3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm21788J3QNH3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm21788J3QNH3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm21788J3QNH3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm21788J3QNH3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Gm21788J3QNH3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm21788J3QNH3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm21788J3QNH3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm21788J3QNH3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm21788J3QNH3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm21788J3QNH3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gm21788J3QNH3 Gm7417-201ENSMUST00000192950 473 ntBASIC16.83■□□□□ 0.28
Gm21788J3QNH3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.83■□□□□ 0.28
Gm21788J3QNH3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm21788J3QNH3 Gm5812-201ENSMUST00000061073 957 ntBASIC16.83■□□□□ 0.28
Gm21788J3QNH3 Gm9870-201ENSMUST00000063874 645 ntBASIC16.83■□□□□ 0.28
Gm21788J3QNH3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm21788J3QNH3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm21788J3QNH3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm21788J3QNH3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm21788J3QNH3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms