Protein–RNA interactions for Protein: F6V5V4

Gm11397, Predicted gene 11397, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11397F6V5V4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11397F6V5V4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11397F6V5V4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11397F6V5V4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11397F6V5V4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm11397F6V5V4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm11397F6V5V4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.49■□□□□ 0.55
Gm11397F6V5V4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm11397F6V5V4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm11397F6V5V4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.49■□□□□ 0.55
Gm11397F6V5V4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm11397F6V5V4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.49■□□□□ 0.55
Gm11397F6V5V4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm11397F6V5V4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.49■□□□□ 0.55
Gm11397F6V5V4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Gm11397F6V5V4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm11397F6V5V4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm11397F6V5V4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Gm11397F6V5V4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm11397F6V5V4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Gm11397F6V5V4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm11397F6V5V4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Gm11397F6V5V4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm11397F6V5V4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm11397F6V5V4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm11397F6V5V4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm11397F6V5V4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11397F6V5V4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11397F6V5V4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.47■□□□□ 0.55
Gm11397F6V5V4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Gm11397F6V5V4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
Gm11397F6V5V4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.47■□□□□ 0.55
Gm11397F6V5V4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11397F6V5V4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11397F6V5V4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11397F6V5V4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11397F6V5V4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11397F6V5V4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11397F6V5V4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11397F6V5V4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11397F6V5V4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11397F6V5V4 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.46■□□□□ 0.55
Gm11397F6V5V4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11397F6V5V4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.46■□□□□ 0.55
Gm11397F6V5V4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.46■□□□□ 0.55
Gm11397F6V5V4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Gm11397F6V5V4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11397F6V5V4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11397F6V5V4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11397F6V5V4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11397F6V5V4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11397F6V5V4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11397F6V5V4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Gm11397F6V5V4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11397F6V5V4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11397F6V5V4 Gm7417-201ENSMUST00000192950 473 ntBASIC18.45■□□□□ 0.54
Gm11397F6V5V4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11397F6V5V4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11397F6V5V4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11397F6V5V4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11397F6V5V4 Golph3-202ENSMUST00000226517 2359 ntBASIC18.45■□□□□ 0.54
Gm11397F6V5V4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11397F6V5V4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11397F6V5V4 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.42■□□□□ 0.54
Gm11397F6V5V4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.42■□□□□ 0.54
Gm11397F6V5V4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11397F6V5V4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11397F6V5V4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11397F6V5V4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11397F6V5V4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11397F6V5V4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11397F6V5V4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Gm11397F6V5V4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11397F6V5V4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11397F6V5V4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11397F6V5V4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms