Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gcn1E9PVA8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gcn1E9PVA8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Gcn1E9PVA8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gcn1E9PVA8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gcn1E9PVA8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gcn1E9PVA8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gcn1E9PVA8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gcn1E9PVA8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.32■□□□□ 0.36
Gcn1E9PVA8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gcn1E9PVA8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Gm6659-201ENSMUST00000174752 547 ntBASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gcn1E9PVA8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.3■□□□□ 0.36
Gcn1E9PVA8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gcn1E9PVA8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.3■□□□□ 0.36
Gcn1E9PVA8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gcn1E9PVA8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.3■□□□□ 0.36
Gcn1E9PVA8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.3■□□□□ 0.36
Gcn1E9PVA8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gcn1E9PVA8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gcn1E9PVA8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.29■□□□□ 0.36
Gcn1E9PVA8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.29■□□□□ 0.36
Gcn1E9PVA8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gcn1E9PVA8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Gcn1E9PVA8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gcn1E9PVA8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Gcn1E9PVA8 Gm26524-201ENSMUST00000192339 390 ntBASIC17.29■□□□□ 0.36
Gcn1E9PVA8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gcn1E9PVA8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.28■□□□□ 0.36
Gcn1E9PVA8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gcn1E9PVA8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gcn1E9PVA8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gcn1E9PVA8 Gm44771-201ENSMUST00000206975 626 ntBASIC17.28■□□□□ 0.36
Gcn1E9PVA8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gcn1E9PVA8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gcn1E9PVA8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Gcn1E9PVA8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Gcn1E9PVA8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gcn1E9PVA8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gcn1E9PVA8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Gcn1E9PVA8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gcn1E9PVA8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.27■□□□□ 0.36
Gcn1E9PVA8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gcn1E9PVA8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gcn1E9PVA8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gcn1E9PVA8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gcn1E9PVA8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gcn1E9PVA8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.27■□□□□ 0.35
Gcn1E9PVA8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.26■□□□□ 0.35
Gcn1E9PVA8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gcn1E9PVA8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.26■□□□□ 0.35
Gcn1E9PVA8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gcn1E9PVA8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gcn1E9PVA8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gcn1E9PVA8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gcn1E9PVA8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gcn1E9PVA8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gcn1E9PVA8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gcn1E9PVA8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gcn1E9PVA8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gcn1E9PVA8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gcn1E9PVA8 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.25■□□□□ 0.35
Gcn1E9PVA8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.25■□□□□ 0.35
Gcn1E9PVA8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.25■□□□□ 0.35
Gcn1E9PVA8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gcn1E9PVA8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gcn1E9PVA8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gcn1E9PVA8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gcn1E9PVA8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gcn1E9PVA8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Gcn1E9PVA8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Gcn1E9PVA8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gcn1E9PVA8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gcn1E9PVA8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gcn1E9PVA8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms