Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx8D3YU81 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rfx8D3YU81 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx8D3YU81 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx8D3YU81 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx8D3YU81 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx8D3YU81 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Rfx8D3YU81 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rfx8D3YU81 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Rfx8D3YU81 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx8D3YU81 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.18■□□□□ 0.98
Rfx8D3YU81 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx8D3YU81 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx8D3YU81 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx8D3YU81 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.17■□□□□ 0.98
Rfx8D3YU81 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx8D3YU81 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.17■□□□□ 0.98
Rfx8D3YU81 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx8D3YU81 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx8D3YU81 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rfx8D3YU81 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx8D3YU81 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx8D3YU81 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx8D3YU81 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.16■□□□□ 0.98
Rfx8D3YU81 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.16■□□□□ 0.98
Rfx8D3YU81 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Rfx8D3YU81 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx8D3YU81 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx8D3YU81 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx8D3YU81 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx8D3YU81 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx8D3YU81 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rfx8D3YU81 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rfx8D3YU81 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx8D3YU81 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx8D3YU81 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx8D3YU81 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.15■□□□□ 0.98
Rfx8D3YU81 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx8D3YU81 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Rfx8D3YU81 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx8D3YU81 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.14■□□□□ 0.98
Rfx8D3YU81 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx8D3YU81 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx8D3YU81 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx8D3YU81 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx8D3YU81 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.14■□□□□ 0.97
Rfx8D3YU81 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.14■□□□□ 0.97
Rfx8D3YU81 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rfx8D3YU81 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rfx8D3YU81 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Rfx8D3YU81 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rfx8D3YU81 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx8D3YU81 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx8D3YU81 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.13■□□□□ 0.97
Rfx8D3YU81 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.13■□□□□ 0.97
Rfx8D3YU81 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx8D3YU81 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx8D3YU81 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx8D3YU81 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.12■□□□□ 0.97
Rfx8D3YU81 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx8D3YU81 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx8D3YU81 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx8D3YU81 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.12■□□□□ 0.97
Rfx8D3YU81 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx8D3YU81 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rfx8D3YU81 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx8D3YU81 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx8D3YU81 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx8D3YU81 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.12■□□□□ 0.97
Rfx8D3YU81 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rfx8D3YU81 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx8D3YU81 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx8D3YU81 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.11■□□□□ 0.97
Rfx8D3YU81 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx8D3YU81 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx8D3YU81 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx8D3YU81 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx8D3YU81 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx8D3YU81 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx8D3YU81 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx8D3YU81 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx8D3YU81 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx8D3YU81 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rfx8D3YU81 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx8D3YU81 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx8D3YU81 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Rfx8D3YU81 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms