Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h2acC0HKE2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h2acC0HKE2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h2acC0HKE2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h2acC0HKE2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h2acC0HKE2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h2acC0HKE2 Gm5812-201ENSMUST00000061073 957 ntBASIC18.27■□□□□ 0.52
Hist1h2acC0HKE2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hist1h2acC0HKE2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hist1h2acC0HKE2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hist1h2acC0HKE2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hist1h2acC0HKE2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h2acC0HKE2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h2acC0HKE2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h2acC0HKE2 Gm15546-201ENSMUST00000122095 826 ntBASIC18.26■□□□□ 0.51
Hist1h2acC0HKE2 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.26■□□□□ 0.51
Hist1h2acC0HKE2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h2acC0HKE2 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.26■□□□□ 0.51
Hist1h2acC0HKE2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.26■□□□□ 0.51
Hist1h2acC0HKE2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hist1h2acC0HKE2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.25■□□□□ 0.51
Hist1h2acC0HKE2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Gm7143-201ENSMUST00000222811 859 ntBASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h2acC0HKE2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.23■□□□□ 0.51
Hist1h2acC0HKE2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.23■□□□□ 0.51
Hist1h2acC0HKE2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h2acC0HKE2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h2acC0HKE2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.23■□□□□ 0.51
Hist1h2acC0HKE2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h2acC0HKE2 Gm7417-201ENSMUST00000192950 473 ntBASIC18.23■□□□□ 0.51
Hist1h2acC0HKE2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.23■□□□□ 0.51
Hist1h2acC0HKE2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Hist1h2acC0HKE2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h2acC0HKE2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h2acC0HKE2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h2acC0HKE2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h2acC0HKE2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.22■□□□□ 0.51
Hist1h2acC0HKE2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.22■□□□□ 0.51
Hist1h2acC0HKE2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hist1h2acC0HKE2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hist1h2acC0HKE2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hist1h2acC0HKE2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h2acC0HKE2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h2acC0HKE2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h2acC0HKE2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h2acC0HKE2 Iqck-206ENSMUST00000208658 2891 ntBASIC18.21■□□□□ 0.51
Hist1h2acC0HKE2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h2acC0HKE2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h2acC0HKE2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h2acC0HKE2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h2acC0HKE2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h2acC0HKE2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h2acC0HKE2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h2acC0HKE2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h2acC0HKE2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms