Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 Gm45444-201ENSMUST00000211394 898 ntBASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-1A0N8R0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-1A0N8R0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav12d-1A0N8R0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-1A0N8R0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-1A0N8R0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-1A0N8R0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-1A0N8R0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav12d-1A0N8R0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-1A0N8R0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav12d-1A0N8R0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-1A0N8R0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-1A0N8R0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-1A0N8R0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-1A0N8R0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-1A0N8R0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-1A0N8R0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-1A0N8R0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-1A0N8R0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-1A0N8R0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav12d-1A0N8R0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-1A0N8R0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-1A0N8R0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.08■□□□□ 0.17
Trav12d-1A0N8R0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav12d-1A0N8R0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav12d-1A0N8R0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-1A0N8R0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-1A0N8R0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav12d-1A0N8R0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav12d-1A0N8R0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav12d-1A0N8R0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-1A0N8R0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav12d-1A0N8R0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-1A0N8R0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-1A0N8R0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav12d-1A0N8R0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-1A0N8R0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12d-1A0N8R0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12d-1A0N8R0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.07■□□□□ 0.16
Trav12d-1A0N8R0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav12d-1A0N8R0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12d-1A0N8R0 Gm10399-202ENSMUST00000202768 748 ntBASIC16.07■□□□□ 0.16
Trav12d-1A0N8R0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12d-1A0N8R0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12d-1A0N8R0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12d-1A0N8R0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12d-1A0N8R0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12d-1A0N8R0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12d-1A0N8R0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-1A0N8R0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-1A0N8R0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-1A0N8R0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav12d-1A0N8R0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-1A0N8R0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-1A0N8R0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trav12d-1A0N8R0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-1A0N8R0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-1A0N8R0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-1A0N8R0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-1A0N8R0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-1A0N8R0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-1A0N8R0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12d-1A0N8R0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12d-1A0N8R0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12d-1A0N8R0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12d-1A0N8R0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12d-1A0N8R0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav12d-1A0N8R0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12d-1A0N8R0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trav12d-1A0N8R0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-1A0N8R0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-1A0N8R0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms