Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mindy4b-psA0A1W2P7H6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Mindy4b-psA0A1W2P7H6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.2■□□□□ 0.99
Mindy4b-psA0A1W2P7H6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.2■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.18■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.17■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.16■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.16■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Gm6139-201ENSMUST00000079261 882 ntBASIC21.15■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mindy4b-psA0A1W2P7H6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Gm12251-201ENSMUST00000117893 792 ntBASIC21.14■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Spcs1-204ENSMUST00000226782 949 ntBASIC21.14■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Gm15039-201ENSMUST00000118914 875 ntBASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Gm8493-201ENSMUST00000196881 489 ntBASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.12■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.12■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.11■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Mindy4b-psA0A1W2P7H6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms