Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-5A0A140T8M6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-5A0A140T8M6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv3-5A0A140T8M6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Igkv3-5A0A140T8M6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv3-5A0A140T8M6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv3-5A0A140T8M6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Igkv3-5A0A140T8M6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv3-5A0A140T8M6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv3-5A0A140T8M6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv3-5A0A140T8M6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv3-5A0A140T8M6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv3-5A0A140T8M6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv3-5A0A140T8M6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Igkv3-5A0A140T8M6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Igkv3-5A0A140T8M6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv3-5A0A140T8M6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv3-5A0A140T8M6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Igkv3-5A0A140T8M6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv3-5A0A140T8M6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv3-5A0A140T8M6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Igkv3-5A0A140T8M6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.58□□□□□ -0.4
Igkv3-5A0A140T8M6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv3-5A0A140T8M6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv3-5A0A140T8M6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC12.58□□□□□ -0.4
Igkv3-5A0A140T8M6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Igkv3-5A0A140T8M6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv3-5A0A140T8M6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv3-5A0A140T8M6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Igkv3-5A0A140T8M6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv3-5A0A140T8M6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv3-5A0A140T8M6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv3-5A0A140T8M6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.56□□□□□ -0.4
Igkv3-5A0A140T8M6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms