Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap99A0A140LIX9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Cfap99A0A140LIX9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap99A0A140LIX9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap99A0A140LIX9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap99A0A140LIX9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap99A0A140LIX9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap99A0A140LIX9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap99A0A140LIX9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Cfap99A0A140LIX9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cfap99A0A140LIX9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cfap99A0A140LIX9 Gm43173-201ENSMUST00000202246 593 ntBASIC23.91■■□□□ 1.42
Cfap99A0A140LIX9 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.91■■□□□ 1.42
Cfap99A0A140LIX9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cfap99A0A140LIX9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cfap99A0A140LIX9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.91■■□□□ 1.42
Cfap99A0A140LIX9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Cfap99A0A140LIX9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cfap99A0A140LIX9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cfap99A0A140LIX9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Cfap99A0A140LIX9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.9■■□□□ 1.42
Cfap99A0A140LIX9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.9■■□□□ 1.42
Cfap99A0A140LIX9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cfap99A0A140LIX9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cfap99A0A140LIX9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cfap99A0A140LIX9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cfap99A0A140LIX9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Cfap99A0A140LIX9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Cfap99A0A140LIX9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Cfap99A0A140LIX9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cfap99A0A140LIX9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cfap99A0A140LIX9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cfap99A0A140LIX9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cfap99A0A140LIX9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.88■■□□□ 1.41
Cfap99A0A140LIX9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cfap99A0A140LIX9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.88■■□□□ 1.41
Cfap99A0A140LIX9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cfap99A0A140LIX9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cfap99A0A140LIX9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cfap99A0A140LIX9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cfap99A0A140LIX9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cfap99A0A140LIX9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Cfap99A0A140LIX9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cfap99A0A140LIX9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.87■■□□□ 1.41
Cfap99A0A140LIX9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Cfap99A0A140LIX9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cfap99A0A140LIX9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cfap99A0A140LIX9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cfap99A0A140LIX9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.86■■□□□ 1.41
Cfap99A0A140LIX9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC23.86■■□□□ 1.41
Cfap99A0A140LIX9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cfap99A0A140LIX9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Cfap99A0A140LIX9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Cfap99A0A140LIX9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cfap99A0A140LIX9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Cfap99A0A140LIX9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cfap99A0A140LIX9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.84■■□□□ 1.41
Cfap99A0A140LIX9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Cfap99A0A140LIX9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cfap99A0A140LIX9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cfap99A0A140LIX9 Gm29257-201ENSMUST00000186115 639 ntBASIC23.83■■□□□ 1.41
Cfap99A0A140LIX9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Cfap99A0A140LIX9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cfap99A0A140LIX9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Cfap99A0A140LIX9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cfap99A0A140LIX9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Cfap99A0A140LIX9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cfap99A0A140LIX9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cfap99A0A140LIX9 Gm12251-201ENSMUST00000117893 792 ntBASIC23.82■■□□□ 1.4
Cfap99A0A140LIX9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cfap99A0A140LIX9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cfap99A0A140LIX9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Cfap99A0A140LIX9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cfap99A0A140LIX9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cfap99A0A140LIX9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Cfap99A0A140LIX9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
Cfap99A0A140LIX9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cfap99A0A140LIX9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cfap99A0A140LIX9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.81■■□□□ 1.4
Cfap99A0A140LIX9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cfap99A0A140LIX9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cfap99A0A140LIX9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cfap99A0A140LIX9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cfap99A0A140LIX9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.8■■□□□ 1.4
Cfap99A0A140LIX9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cfap99A0A140LIX9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Cfap99A0A140LIX9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cfap99A0A140LIX9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.8■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms