Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Gm45364-201ENSMUST00000210883 159 ntBASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 AC122428.2-201ENSMUST00000216321 1832 ntBASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv8-28A0A0G2JE47 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv8-28A0A0G2JE47 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC12.52□□□□□ -0.4
Igkv8-28A0A0G2JE47 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC12.52□□□□□ -0.4
Igkv8-28A0A0G2JE47 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv8-28A0A0G2JE47 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv8-28A0A0G2JE47 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Igkv8-28A0A0G2JE47 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv8-28A0A0G2JE47 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv8-28A0A0G2JE47 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-28A0A0G2JE47 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-28A0A0G2JE47 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-28A0A0G2JE47 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-28A0A0G2JE47 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-28A0A0G2JE47 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-28A0A0G2JE47 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Igkv8-28A0A0G2JE47 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 AC158990.1-201ENSMUST00000221450 2016 ntBASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-28A0A0G2JE47 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv8-28A0A0G2JE47 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms