Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Gm6821-201ENSMUST00000107540 542 ntBASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav4-3A0A0B4J1K1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-3A0A0B4J1K1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav4-3A0A0B4J1K1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-3A0A0B4J1K1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trav4-3A0A0B4J1K1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Trav4-3A0A0B4J1K1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-3A0A0B4J1K1 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.64□□□□□ -0.23
Trav4-3A0A0B4J1K1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-3A0A0B4J1K1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-3A0A0B4J1K1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-3A0A0B4J1K1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-3A0A0B4J1K1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav4-3A0A0B4J1K1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-3A0A0B4J1K1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav4-3A0A0B4J1K1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav4-3A0A0B4J1K1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-3A0A0B4J1K1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-3A0A0B4J1K1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-3A0A0B4J1K1 Gm9939-201ENSMUST00000067161 1154 ntBASIC13.62□□□□□ -0.23
Trav4-3A0A0B4J1K1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-3A0A0B4J1K1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-3A0A0B4J1K1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-3A0A0B4J1K1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-3A0A0B4J1K1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-3A0A0B4J1K1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-3A0A0B4J1K1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-3A0A0B4J1K1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-3A0A0B4J1K1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-3A0A0B4J1K1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-3A0A0B4J1K1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-3A0A0B4J1K1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav4-3A0A0B4J1K1 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.6□□□□□ -0.23
Trav4-3A0A0B4J1K1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav4-3A0A0B4J1K1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-3A0A0B4J1K1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-3A0A0B4J1K1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-3A0A0B4J1K1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-3A0A0B4J1K1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav4-3A0A0B4J1K1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav4-3A0A0B4J1K1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-3A0A0B4J1K1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-3A0A0B4J1K1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-3A0A0B4J1K1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms