Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Golph3-205ENSMUST00000228671 2842 ntBASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv20A0A0B4J1H5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.9■□□□□ 0.46
Trbv20A0A0B4J1H5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv20A0A0B4J1H5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.89■□□□□ 0.46
Trbv20A0A0B4J1H5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv20A0A0B4J1H5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv20A0A0B4J1H5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv20A0A0B4J1H5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trbv20A0A0B4J1H5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv20A0A0B4J1H5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv20A0A0B4J1H5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv20A0A0B4J1H5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv20A0A0B4J1H5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv20A0A0B4J1H5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv20A0A0B4J1H5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv20A0A0B4J1H5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv20A0A0B4J1H5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv20A0A0B4J1H5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv20A0A0B4J1H5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv20A0A0B4J1H5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv20A0A0B4J1H5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv20A0A0B4J1H5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv20A0A0B4J1H5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv20A0A0B4J1H5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv20A0A0B4J1H5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv20A0A0B4J1H5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv20A0A0B4J1H5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv20A0A0B4J1H5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.86■□□□□ 0.45
Trbv20A0A0B4J1H5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv20A0A0B4J1H5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Trbv20A0A0B4J1H5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv20A0A0B4J1H5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv20A0A0B4J1H5 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.84■□□□□ 0.45
Trbv20A0A0B4J1H5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv20A0A0B4J1H5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv20A0A0B4J1H5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.84■□□□□ 0.45
Trbv20A0A0B4J1H5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv20A0A0B4J1H5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv20A0A0B4J1H5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv20A0A0B4J1H5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms