Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1aA0A0A6YYP6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1aA0A0A6YYP6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.94■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.93■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.92■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1aA0A0A6YYP6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.92■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.91■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.91■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sirpb1aA0A0A6YYP6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.89■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.89■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.88■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.88■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1aA0A0A6YYP6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sirpb1aA0A0A6YYP6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.87■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sirpb1aA0A0A6YYP6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sirpb1aA0A0A6YYP6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms