Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-47A0A0A6YY41 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-47A0A0A6YY41 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-47A0A0A6YY41 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-47A0A0A6YY41 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.52■□□□□ 0.24
Ighv1-47A0A0A6YY41 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-47A0A0A6YY41 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.52■□□□□ 0.23
Ighv1-47A0A0A6YY41 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-47A0A0A6YY41 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-47A0A0A6YY41 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-47A0A0A6YY41 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-47A0A0A6YY41 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-47A0A0A6YY41 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Ighv1-47A0A0A6YY41 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ighv1-47A0A0A6YY41 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-47A0A0A6YY41 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-47A0A0A6YY41 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-47A0A0A6YY41 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-47A0A0A6YY41 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-47A0A0A6YY41 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-47A0A0A6YY41 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-47A0A0A6YY41 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ighv1-47A0A0A6YY41 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.48■□□□□ 0.23
Ighv1-47A0A0A6YY41 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.48■□□□□ 0.23
Ighv1-47A0A0A6YY41 Gm7417-201ENSMUST00000192950 473 ntBASIC16.48■□□□□ 0.23
Ighv1-47A0A0A6YY41 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-47A0A0A6YY41 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-47A0A0A6YY41 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-47A0A0A6YY41 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-47A0A0A6YY41 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-47A0A0A6YY41 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-47A0A0A6YY41 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-47A0A0A6YY41 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-47A0A0A6YY41 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.46■□□□□ 0.23
Ighv1-47A0A0A6YY41 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ighv1-47A0A0A6YY41 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-47A0A0A6YY41 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-47A0A0A6YY41 Etf1-202ENSMUST00000180351 108 ntBASIC16.46■□□□□ 0.23
Ighv1-47A0A0A6YY41 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-47A0A0A6YY41 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.46■□□□□ 0.23
Ighv1-47A0A0A6YY41 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-47A0A0A6YY41 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ighv1-47A0A0A6YY41 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.45■□□□□ 0.22
Ighv1-47A0A0A6YY41 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-47A0A0A6YY41 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-47A0A0A6YY41 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-47A0A0A6YY41 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-47A0A0A6YY41 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-47A0A0A6YY41 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.45■□□□□ 0.22
Ighv1-47A0A0A6YY41 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-47A0A0A6YY41 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-47A0A0A6YY41 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-47A0A0A6YY41 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.45■□□□□ 0.22
Ighv1-47A0A0A6YY41 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-47A0A0A6YY41 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-47A0A0A6YY41 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-47A0A0A6YY41 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.44■□□□□ 0.22
Ighv1-47A0A0A6YY41 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-47A0A0A6YY41 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Ighv1-47A0A0A6YY41 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.44■□□□□ 0.22
Ighv1-47A0A0A6YY41 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-47A0A0A6YY41 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-47A0A0A6YY41 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms