Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18■□□□□ 0.47
Gm28557A0A087WQQ0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28557A0A087WQQ0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28557A0A087WQQ0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28557A0A087WQQ0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gm28557A0A087WQQ0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gm28557A0A087WQQ0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Gm28557A0A087WQQ0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm28557A0A087WQQ0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28557A0A087WQQ0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28557A0A087WQQ0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm28557A0A087WQQ0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Gm28557A0A087WQQ0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28557A0A087WQQ0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28557A0A087WQQ0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28557A0A087WQQ0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28557A0A087WQQ0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28557A0A087WQQ0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28557A0A087WQQ0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28557A0A087WQQ0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Mir6538-201ENSMUST00000183713 110 ntBASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28557A0A087WQQ0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28557A0A087WQQ0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.97■□□□□ 0.47
Gm28557A0A087WQQ0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28557A0A087WQQ0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28557A0A087WQQ0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28557A0A087WQQ0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28557A0A087WQQ0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28557A0A087WQQ0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28557A0A087WQQ0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28557A0A087WQQ0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28557A0A087WQQ0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28557A0A087WQQ0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28557A0A087WQQ0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28557A0A087WQQ0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28557A0A087WQQ0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28557A0A087WQQ0 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.96■□□□□ 0.47
Gm28557A0A087WQQ0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.96■□□□□ 0.47
Gm28557A0A087WQQ0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28557A0A087WQQ0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28557A0A087WQQ0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28557A0A087WQQ0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28557A0A087WQQ0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28557A0A087WQQ0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28557A0A087WQQ0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Gm28557A0A087WQQ0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28557A0A087WQQ0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28557A0A087WQQ0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.94■□□□□ 0.46
Gm28557A0A087WQQ0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28557A0A087WQQ0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28557A0A087WQQ0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28557A0A087WQQ0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.94■□□□□ 0.46
Gm28557A0A087WQQ0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28557A0A087WQQ0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28557A0A087WQQ0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms