Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav21-dv12A0A075B6C4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav21-dv12A0A075B6C4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav21-dv12A0A075B6C4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav21-dv12A0A075B6C4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav21-dv12A0A075B6C4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.33■□□□□ 0.04
Trav21-dv12A0A075B6C4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav21-dv12A0A075B6C4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.32■□□□□ 0.04
Trav21-dv12A0A075B6C4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav21-dv12A0A075B6C4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav21-dv12A0A075B6C4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav21-dv12A0A075B6C4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav21-dv12A0A075B6C4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav21-dv12A0A075B6C4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gm7143-201ENSMUST00000222811 859 ntBASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gm5812-201ENSMUST00000061073 957 ntBASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.29■□□□□ 0.04
Trav21-dv12A0A075B6C4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gm15546-201ENSMUST00000122095 826 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms