Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav6-5A0A075B6B5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-5A0A075B6B5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-5A0A075B6B5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-5A0A075B6B5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trav6-5A0A075B6B5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-5A0A075B6B5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav6-5A0A075B6B5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-5A0A075B6B5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-5A0A075B6B5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-5A0A075B6B5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-5A0A075B6B5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trav6-5A0A075B6B5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-5A0A075B6B5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav6-5A0A075B6B5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-5A0A075B6B5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Trav6-5A0A075B6B5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav6-5A0A075B6B5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-5A0A075B6B5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-5A0A075B6B5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-5A0A075B6B5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-5A0A075B6B5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-5A0A075B6B5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav6-5A0A075B6B5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-5A0A075B6B5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav6-5A0A075B6B5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6-5A0A075B6B5 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-5A0A075B6B5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav6-5A0A075B6B5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-5A0A075B6B5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-5A0A075B6B5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav6-5A0A075B6B5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-5A0A075B6B5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav6-5A0A075B6B5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav6-5A0A075B6B5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-5A0A075B6B5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-5A0A075B6B5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-5A0A075B6B5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav6-5A0A075B6B5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Golph3-205ENSMUST00000228671 2842 ntBASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-5A0A075B6B5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-5A0A075B6B5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms