Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv1A0A075B657 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv1A0A075B657 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trdv1A0A075B657 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trdv1A0A075B657 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv1A0A075B657 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv1A0A075B657 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv1A0A075B657 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv1A0A075B657 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv1A0A075B657 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv1A0A075B657 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdv1A0A075B657 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trdv1A0A075B657 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trdv1A0A075B657 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Trdv1A0A075B657 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.23■□□□□ 0.03
Trdv1A0A075B657 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdv1A0A075B657 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Trdv1A0A075B657 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trdv1A0A075B657 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.23■□□□□ 0.03
Trdv1A0A075B657 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdv1A0A075B657 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.23■□□□□ 0.03
Trdv1A0A075B657 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv1A0A075B657 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv1A0A075B657 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv1A0A075B657 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv1A0A075B657 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv1A0A075B657 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv1A0A075B657 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv1A0A075B657 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdv1A0A075B657 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trdv1A0A075B657 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trdv1A0A075B657 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdv1A0A075B657 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdv1A0A075B657 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdv1A0A075B657 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdv1A0A075B657 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdv1A0A075B657 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.21■□□□□ 0.03
Trdv1A0A075B657 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trdv1A0A075B657 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.21■□□□□ 0.03
Trdv1A0A075B657 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdv1A0A075B657 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trdv1A0A075B657 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trdv1A0A075B657 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv1A0A075B657 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdv1A0A075B657 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trdv1A0A075B657 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trdv1A0A075B657 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdv1A0A075B657 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.19■□□□□ 0.02
Trdv1A0A075B657 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.19■□□□□ 0.02
Trdv1A0A075B657 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.19■□□□□ 0.02
Trdv1A0A075B657 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.19■□□□□ 0.02
Trdv1A0A075B657 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trdv1A0A075B657 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.19■□□□□ 0.02
Trdv1A0A075B657 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv1A0A075B657 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.18■□□□□ 0.02
Trdv1A0A075B657 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv1A0A075B657 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv1A0A075B657 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv1A0A075B657 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trdv1A0A075B657 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv1A0A075B657 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv1A0A075B657 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv1A0A075B657 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv1A0A075B657 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv1A0A075B657 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv1A0A075B657 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv1A0A075B657 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms