Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-4-dv10A0A075B651 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav4-4-dv10A0A075B651 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-4-dv10A0A075B651 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-4-dv10A0A075B651 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-4-dv10A0A075B651 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-4-dv10A0A075B651 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4-4-dv10A0A075B651 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-4-dv10A0A075B651 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-4-dv10A0A075B651 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-4-dv10A0A075B651 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-4-dv10A0A075B651 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-4-dv10A0A075B651 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Trav4-4-dv10A0A075B651 Gm45444-201ENSMUST00000211394 898 ntBASIC15.59■□□□□ 0.09
Trav4-4-dv10A0A075B651 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-4-dv10A0A075B651 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-4-dv10A0A075B651 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-4-dv10A0A075B651 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4-4-dv10A0A075B651 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav4-4-dv10A0A075B651 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-4-dv10A0A075B651 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-4-dv10A0A075B651 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-4-dv10A0A075B651 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-4-dv10A0A075B651 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.58■□□□□ 0.08
Trav4-4-dv10A0A075B651 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-4-dv10A0A075B651 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-4-dv10A0A075B651 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-4-dv10A0A075B651 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4-4-dv10A0A075B651 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-4-dv10A0A075B651 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav4-4-dv10A0A075B651 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-4-dv10A0A075B651 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav4-4-dv10A0A075B651 Gm10399-202ENSMUST00000202768 748 ntBASIC15.57■□□□□ 0.08
Trav4-4-dv10A0A075B651 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-4-dv10A0A075B651 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav4-4-dv10A0A075B651 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-4-dv10A0A075B651 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav4-4-dv10A0A075B651 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-4-dv10A0A075B651 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.55■□□□□ 0.08
Trav4-4-dv10A0A075B651 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-4-dv10A0A075B651 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-4-dv10A0A075B651 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-4-dv10A0A075B651 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-4-dv10A0A075B651 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-4-dv10A0A075B651 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-4-dv10A0A075B651 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-4-dv10A0A075B651 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav4-4-dv10A0A075B651 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav4-4-dv10A0A075B651 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-4-dv10A0A075B651 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-4-dv10A0A075B651 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trav4-4-dv10A0A075B651 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-4-dv10A0A075B651 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-4-dv10A0A075B651 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-4-dv10A0A075B651 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-4-dv10A0A075B651 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav4-4-dv10A0A075B651 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-4-dv10A0A075B651 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms