Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-3A0A075B648 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-3A0A075B648 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-3A0A075B648 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-3A0A075B648 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav12-3A0A075B648 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-3A0A075B648 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav12-3A0A075B648 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-3A0A075B648 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-3A0A075B648 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-3A0A075B648 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-3A0A075B648 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-3A0A075B648 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-3A0A075B648 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav12-3A0A075B648 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav12-3A0A075B648 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav12-3A0A075B648 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-3A0A075B648 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav12-3A0A075B648 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav12-3A0A075B648 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-3A0A075B648 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-3A0A075B648 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-3A0A075B648 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Trav12-3A0A075B648 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-3A0A075B648 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav12-3A0A075B648 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Zfp131-205ENSMUST00000223812 663 ntBASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav12-3A0A075B648 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav12-3A0A075B648 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trav12-3A0A075B648 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav12-3A0A075B648 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Gm9397-201ENSMUST00000200125 605 ntBASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Gm9812-201ENSMUST00000061934 968 ntBASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-3A0A075B648 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-3A0A075B648 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Trav12-3A0A075B648 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms