Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14n-3A0A075B645 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trav14n-3A0A075B645 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14n-3A0A075B645 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.08■□□□□ 0
Trav14n-3A0A075B645 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.08■□□□□ 0
Trav14n-3A0A075B645 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14n-3A0A075B645 Golph3-205ENSMUST00000228671 2842 ntBASIC15.08■□□□□ 0
Trav14n-3A0A075B645 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14n-3A0A075B645 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14n-3A0A075B645 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14n-3A0A075B645 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.08■□□□□ 0
Trav14n-3A0A075B645 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-3A0A075B645 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav14n-3A0A075B645 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav14n-3A0A075B645 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav14n-3A0A075B645 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav14n-3A0A075B645 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav14n-3A0A075B645 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.05■□□□□ -0
Trav14n-3A0A075B645 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav14n-3A0A075B645 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Trav14n-3A0A075B645 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav14n-3A0A075B645 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Trav14n-3A0A075B645 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav14n-3A0A075B645 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav14n-3A0A075B645 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav14n-3A0A075B645 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-3A0A075B645 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.03■□□□□ -0
Trav14n-3A0A075B645 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav14n-3A0A075B645 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.03■□□□□ -0
Trav14n-3A0A075B645 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav14n-3A0A075B645 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav14n-3A0A075B645 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.03■□□□□ -0
Trav14n-3A0A075B645 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.03■□□□□ -0
Trav14n-3A0A075B645 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.03■□□□□ -0
Trav14n-3A0A075B645 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.03■□□□□ -0
Trav14n-3A0A075B645 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav14n-3A0A075B645 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.03■□□□□ -0
Trav14n-3A0A075B645 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.03■□□□□ -0
Trav14n-3A0A075B645 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav14n-3A0A075B645 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav14n-3A0A075B645 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms