Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-7-dv9A0A075B639 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-7-dv9A0A075B639 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trav6-7-dv9A0A075B639 Mir6236-201ENSMUST00000184437 123 ntBASIC17.75■□□□□ 0.43
Trav6-7-dv9A0A075B639 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav6-7-dv9A0A075B639 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav6-7-dv9A0A075B639 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-7-dv9A0A075B639 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav6-7-dv9A0A075B639 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.75■□□□□ 0.43
Trav6-7-dv9A0A075B639 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-7-dv9A0A075B639 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-7-dv9A0A075B639 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-7-dv9A0A075B639 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-7-dv9A0A075B639 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-7-dv9A0A075B639 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.74■□□□□ 0.43
Trav6-7-dv9A0A075B639 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-7-dv9A0A075B639 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-7-dv9A0A075B639 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-7-dv9A0A075B639 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-7-dv9A0A075B639 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.73■□□□□ 0.43
Trav6-7-dv9A0A075B639 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-7-dv9A0A075B639 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-7-dv9A0A075B639 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trav6-7-dv9A0A075B639 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-7-dv9A0A075B639 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-7-dv9A0A075B639 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trav6-7-dv9A0A075B639 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-7-dv9A0A075B639 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-7-dv9A0A075B639 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-7-dv9A0A075B639 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-7-dv9A0A075B639 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-7-dv9A0A075B639 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav6-7-dv9A0A075B639 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-7-dv9A0A075B639 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav6-7-dv9A0A075B639 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.71■□□□□ 0.43
Trav6-7-dv9A0A075B639 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-7-dv9A0A075B639 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Trav6-7-dv9A0A075B639 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trav6-7-dv9A0A075B639 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav6-7-dv9A0A075B639 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-7-dv9A0A075B639 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-7-dv9A0A075B639 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-7-dv9A0A075B639 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.7■□□□□ 0.42
Trav6-7-dv9A0A075B639 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.7■□□□□ 0.42
Trav6-7-dv9A0A075B639 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.7■□□□□ 0.42
Trav6-7-dv9A0A075B639 Gm9959-201ENSMUST00000068277 390 ntBASIC17.7■□□□□ 0.42
Trav6-7-dv9A0A075B639 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-7-dv9A0A075B639 Notumos-201ENSMUST00000151998 2659 ntBASIC17.7■□□□□ 0.42
Trav6-7-dv9A0A075B639 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav6-7-dv9A0A075B639 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-7-dv9A0A075B639 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-7-dv9A0A075B639 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-7-dv9A0A075B639 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-7-dv9A0A075B639 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-7-dv9A0A075B639 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav6-7-dv9A0A075B639 Gm22238-201ENSMUST00000175222 88 ntBASIC17.68■□□□□ 0.42
Trav6-7-dv9A0A075B639 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-7-dv9A0A075B639 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-7-dv9A0A075B639 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-7-dv9A0A075B639 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-7-dv9A0A075B639 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav6-7-dv9A0A075B639 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-7-dv9A0A075B639 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-7-dv9A0A075B639 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.67■□□□□ 0.42
Trav6-7-dv9A0A075B639 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-7-dv9A0A075B639 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-7-dv9A0A075B639 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-7-dv9A0A075B639 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-7-dv9A0A075B639 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-7-dv9A0A075B639 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-7-dv9A0A075B639 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-7-dv9A0A075B639 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-7-dv9A0A075B639 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Trav6-7-dv9A0A075B639 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-7-dv9A0A075B639 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms