Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4-2A0A075B638 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav4-2A0A075B638 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav4-2A0A075B638 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav4-2A0A075B638 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.83■□□□□ 0.12
Trav4-2A0A075B638 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav4-2A0A075B638 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav4-2A0A075B638 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav4-2A0A075B638 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-2A0A075B638 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-2A0A075B638 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-2A0A075B638 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-2A0A075B638 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-2A0A075B638 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav4-2A0A075B638 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-2A0A075B638 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trav4-2A0A075B638 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-2A0A075B638 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-2A0A075B638 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4-2A0A075B638 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-2A0A075B638 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav4-2A0A075B638 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-2A0A075B638 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-2A0A075B638 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav4-2A0A075B638 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav4-2A0A075B638 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-2A0A075B638 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-2A0A075B638 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-2A0A075B638 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-2A0A075B638 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Trav4-2A0A075B638 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4-2A0A075B638 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4-2A0A075B638 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Trav4-2A0A075B638 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-2A0A075B638 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-2A0A075B638 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-2A0A075B638 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-2A0A075B638 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-2A0A075B638 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-2A0A075B638 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4-2A0A075B638 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav4-2A0A075B638 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-2A0A075B638 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-2A0A075B638 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-2A0A075B638 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-2A0A075B638 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav4-2A0A075B638 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-2A0A075B638 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav4-2A0A075B638 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-2A0A075B638 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4-2A0A075B638 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms