Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.02■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.02■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Mir6538-201ENSMUST00000183713 110 ntBASIC17.01■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.01■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.96■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15d-1-dv6d-1A0A075B624 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.95■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms