Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-4A0A075B620 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-4A0A075B620 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav7n-4A0A075B620 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-4A0A075B620 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7n-4A0A075B620 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7n-4A0A075B620 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.08■□□□□ 0.01
Trav7n-4A0A075B620 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7n-4A0A075B620 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.08■□□□□ 0
Trav7n-4A0A075B620 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.08■□□□□ 0
Trav7n-4A0A075B620 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7n-4A0A075B620 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7n-4A0A075B620 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav7n-4A0A075B620 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7n-4A0A075B620 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7n-4A0A075B620 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7n-4A0A075B620 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7n-4A0A075B620 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7n-4A0A075B620 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav7n-4A0A075B620 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms