Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-5A0A075B604 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Gm43137-201ENSMUST00000198052 594 ntBASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-5A0A075B604 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7n-5A0A075B604 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7n-5A0A075B604 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7n-5A0A075B604 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav7n-5A0A075B604 Gm27454-201ENSMUST00000185090 204 ntBASIC16.42■□□□□ 0.22
Trav7n-5A0A075B604 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav7n-5A0A075B604 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7n-5A0A075B604 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7n-5A0A075B604 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-5A0A075B604 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-5A0A075B604 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-5A0A075B604 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-5A0A075B604 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-5A0A075B604 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-5A0A075B604 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav7n-5A0A075B604 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-5A0A075B604 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-5A0A075B604 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-5A0A075B604 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-5A0A075B604 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-5A0A075B604 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7n-5A0A075B604 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav7n-5A0A075B604 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7n-5A0A075B604 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav7n-5A0A075B604 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7n-5A0A075B604 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav7n-5A0A075B604 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7n-5A0A075B604 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7n-5A0A075B604 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav7n-5A0A075B604 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7n-5A0A075B604 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7n-5A0A075B604 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7n-5A0A075B604 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Trav7n-5A0A075B604 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7n-5A0A075B604 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Trav7n-5A0A075B604 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.39■□□□□ 0.21
Trav7n-5A0A075B604 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7n-5A0A075B604 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-5A0A075B604 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7n-5A0A075B604 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7n-5A0A075B604 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7n-5A0A075B604 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7n-5A0A075B604 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.36■□□□□ 0.21
Trav7n-5A0A075B604 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7n-5A0A075B604 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trav7n-5A0A075B604 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.36■□□□□ 0.21
Trav7n-5A0A075B604 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7n-5A0A075B604 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7n-5A0A075B604 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Trav7n-5A0A075B604 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.35■□□□□ 0.21
Trav7n-5A0A075B604 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7n-5A0A075B604 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7n-5A0A075B604 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7n-5A0A075B604 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7n-5A0A075B604 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms